Gene Information

Name : Psyr_0472 (Psyr_0472)
Accession : YP_233580.1
Strain : Pseudomonas syringae B728a
Genome accession: NC_007005
Putative virulence/resistance : Unknown
Product : deoxyribonucleotide triphosphate pyrophosphatase
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0127
EC number : -
Position : 511604 - 512197 bp
Length : 594 bp
Strand : -
Note : HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine

DNA sequence :
ATGAACCTCACACAACTCGTACTGGCCAGCCACAATGGCGGCAAACTCAAGGAACTCCAGGCCATGCTCGGCGACAGCGT
AACGCTGCGCTCGGTCAGCGAGTTCAGTCTGGTGGAGCCGGAAGAAACCGGCCTGTCCTTCGTCGAGAATGCGATCCTCA
AGGCACGCAACGCCGCGCGCCTGTCCGGCCTGCCTGCGCTGGCCGACGACTCGGGGCTGGCAGTGGACTTTCTCGGCGGT
GCGCCGGGTATCTATTCAGCACGCTACGCCGATGGCCAGGGCGATGCCGCCAACAACGCCAAGCTGCTGGAGGCGCTTAA
AGACGTGCCGGACGAACAGCGTGGTGCGCAGTTCGTGTGCGTATTGGCACTGGTACGCCACGCCGACGACCCATTGCCGA
TCCTCTGTGAAGGACTGTGGCACGGGCGCATCCTGCACGCCGCCAGCGGCGAACACGGCTTCGGCTATGACCCGCTGTTC
TGGGTGCCGGAGCGCAACTGCTCGAGCGCCGAACTGGGCCCGACCGAAAAAAACCAGCTCAGCCACCGCGCCCGCGCCAT
GGTCCTGTTGCGGCAACGCCTGGGTCTGCAATGA

Protein sequence :
MNLTQLVLASHNGGKLKELQAMLGDSVTLRSVSEFSLVEPEETGLSFVENAILKARNAARLSGLPALADDSGLAVDFLGG
APGIYSARYADGQGDAANNAKLLEALKDVPDEQRGAQFVCVLALVRHADDPLPILCEGLWHGRILHAASGEHGFGYDPLF
WVPERNCSSAELGPTEKNQLSHRARAMVLLRQRLGLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1465 YP_001800859.1 deoxyribonucleotide triphosphate pyrophosphatase Not tested Not named Protein 2e-24 46