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Name : Psyr_4615 (Psyr_4615) Accession : YP_237683.1 Strain : Pseudomonas syringae B728a Genome accession: NC_007005 Putative virulence/resistance : Virulence Product : spermidine/putrescine ABC transporter ATP-binding subunit Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG3842 EC number : - Position : 5472997 - 5474121 bp Length : 1125 bp Strand : - Note : - DNA sequence : ATGAGCGACGTCGATACAAGCGCTGGAGCAAATGATGTTCTGGTCAGCTTTCGTGGTGTGCAGAAGAGCTACGACGGCGA AGCACTGATCGTCAAAGACCTCAACCTGGACATTCGCAAGGGCGAGTTCCTGACCCTGCTCGGTCCTTCCGGCTCCGGCA AGACCACCAGTCTGATGATGCTGGCCGGTTTCGAGACCCCGACGGCCGGTGAAATCCTCCTCGGTGGCCGCGCCATCAAC AACGTGCCACCGCATAAACGCGACATCGGCATGGTGTTCCAGAACTACGCCTTGTTTCCGCACATGACCGTGGCCGAGAA CCTGGCGTTCCCGTTATCGGTGCGTGGCATGAGCAAGACAGACGTCGGCGAGAAGGTCAAAAAGGCACTGGGCATGGTCC AGCTCGATACCTTTGCGCATCGCTATCCGGCGCAGCTGTCCGGTGGCCAGCAGCAGCGCGTTGCGCTGGCGCGTGCGCTG GTCTTCGAACCGCAACTGGTGCTGATGGATGAGCCGCTCGGCGCCCTCGACAAGCAGCTGCGCGAACACATGCAGATGGA GATCAAGCACTTGCACCAGCGCCTGGGTGTGACCGTGGTCTATGTGACTCACGACCAGGGCGAAGCGCTGACCATGTCGG ACCGGGTCGCGGTCTTCCATCAGGGCGAGATCCAGCAGATCGCGCCGCCCCGCAGCTTGTACGAAGAACCGAAGAACACC TTCGTCGCCAACTTCATCGGCGAGAACAACCGCCTCAACGGACGTCTGGTCAGTCAGGACGGCGACCGCTGTGTGGTCGA GCTGGAGCGTGGCGAAAAAGTCCACGCGCTGGCAATCAATGTCGGTCAGCCAGGTGGCCCGGTCACCCTGTCGATCCGTC CCGAGCGCATCAACCTCAATGGCCGCAGCGAGAGCTGCGCCAACCGTTTTTCCGGTCGTGTGGCCGAGTTCATCTATCTG GGCGACCACGTTCGCGTGCGTCTGGAAGTGGCAGGCAAGCACGACTTCTTCGTCAAACAGCCGATTGCCGAACTGGACCC CGGCCTGAGCGTGGGCGACGTGGTGCCCATCGGCTGGCAAGTCGAGCACGTCCGAGCGCTCGACCCCTTGCAGCAAGTGC ATTGA Protein sequence : MSDVDTSAGANDVLVSFRGVQKSYDGEALIVKDLNLDIRKGEFLTLLGPSGSGKTTSLMMLAGFETPTAGEILLGGRAIN NVPPHKRDIGMVFQNYALFPHMTVAENLAFPLSVRGMSKTDVGEKVKKALGMVQLDTFAHRYPAQLSGGQQQRVALARAL VFEPQLVLMDEPLGALDKQLREHMQMEIKHLHQRLGVTVVYVTHDQGEALTMSDRVAVFHQGEIQQIAPPRSLYEEPKNT FVANFIGENNRLNGRLVSQDGDRCVVELERGEKVHALAINVGQPGGPVTLSIRPERINLNGRSESCANRFSGRVAEFIYL GDHVRVRLEVAGKHDFFVKQPIAELDPGLSVGDVVPIGWQVEHVRALDPLQQVH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| opuBA | YP_005124363.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 5e-37 | 41 |
| opuBA | NP_938494.1 | choline transport system ATP-binding protein | Not tested | Not named | Protein | 3e-37 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Psyr_4615 | YP_237683.1 | spermidine/putrescine ABC transporter ATP-binding subunit | VFG1206 | Protein | 6e-41 | 42 |
