|
Name : Psyr_4522 (Psyr_4522) Accession : YP_237590.1 Strain : Pseudomonas syringae B728a Genome accession: NC_007005 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0753 EC number : 1.11.1.6 Position : 5388173 - 5389618 bp Length : 1446 bp Strand : - Note : - DNA sequence : ATGAGCCAGAAGACCCTTACGACCGCCAGCGGTGCCCCCGTCGCAGACAATCAGAACTCCCGTTCGGCAGGCCCACGTGG TCCTCTATTGCTCGATGATTTCCATCTGATCGAAAAGCTTGCCCACTTCAACCGTGAAAACATCCCGGAGCGTCGCGTGC ACGCCAAGGGGTCGGGTGCTCATGGTACGTTCACCGTGACCCGCGACATCAGCCAATATACCAGCGCCAGGCTGTTCGAC ACGGTTGGCAAGCAGACGCCGATTTTCCTGCGCTTCTCCACCGTAGGCGGCGAGCGTGGTTCGGCTGATACCGAGCGTGA CCCTCGTGGCTTTGCGATCAAGTTTTACACCGAGGAAGGTAACTGGGACATCGTCGGTAACAACACGCCGGTGTTCTTTA TCCGTGACCCCCTGAAATTCCCTGATTTCATTCACACTCAGAAGCGCCTGCCGCAGACCAATCTGAAGAGCCCTCAGATG ATGTGGGATTTCTGGTCGCACTCGCCTGAAGCGCTGCACCAGGTCACTATTCTGTTCTCCGATCGTGGCATTCCGGACGG CTACCGTCACATGCACGGCTTCGGCAGCCACACCTATAGCCTCATCAGTGCAGCAGGTGAGCGTCATTGGGTGAAGTGGC ATTACAAGACCCGCCAGGGGATCAAGAATCTGACGCCCGCAGAGGCTGCGCGCATTGCCGGTACTGATCCTGATTACGCT CAGCGCGATCTGTTCACTGCCATCGAGAAGGGCGACTTCCCCAAGTGGCAGGTGTGCATCCAGTTGATGACCGAAGCTCA GGCGGCGAATCATCATGAAAACCCGTTCGACGTGACCAAGACCTGGTCGCAGAAAGAATACCCGCTGATCGAGGTGGGCG AGCTGGAGTTGAACCGTAACCCGCTCAACTACTTTGCCGAAGTCGAGCAGGCCGCGTTTGGCCCAAGCAACATGGTGCCA GGCGTTGGCCTTTCGCCAGACCGCATGTTGCAAGGGCGCGTATTTGCCTATGCTGATGCGCATCGCTATCGCGTAGGTAC CAACCACCAGCAGTTGCCGATCAATGCGCCCAAGAGTCCGGTGCACAGCTATCAGCGTGACGGGGCGATGGCCTTCGGCA CCAATGGCGGTGCGACGCCAAACTATGAACCGAACAGCTACTCGGATGCGCCGAAAGAGAATCCGCGCTACGCGGAGCCT GCGCTGTCTCTGAACGGTGCAGCAGATCGTCATGATCATCGAGTAGACGGCGATTACTACAGTCAGGCAGGCAAGTTGTT CAACCTGATGAGCGCTGATCAGCAAGCCCTGTTGATTGGCAATATTGCCGGCGCAATGGCAGGCGTTTCCAGTGATGTCG TGCAACGTCAGTTGCAGCATTTCTACAAAGCTGACCCTGCTTACGGCGAAGGCATTGCCCGCGCATTGGACGTAAAACTG GGCTGA Protein sequence : MSQKTLTTASGAPVADNQNSRSAGPRGPLLLDDFHLIEKLAHFNRENIPERRVHAKGSGAHGTFTVTRDISQYTSARLFD TVGKQTPIFLRFSTVGGERGSADTERDPRGFAIKFYTEEGNWDIVGNNTPVFFIRDPLKFPDFIHTQKRLPQTNLKSPQM MWDFWSHSPEALHQVTILFSDRGIPDGYRHMHGFGSHTYSLISAAGERHWVKWHYKTRQGIKNLTPAEAARIAGTDPDYA QRDLFTAIEKGDFPKWQVCIQLMTEAQAANHHENPFDVTKTWSQKEYPLIEVGELELNRNPLNYFAEVEQAAFGPSNMVP GVGLSPDRMLQGRVFAYADAHRYRVGTNHQQLPINAPKSPVHSYQRDGAMAFGTNGGATPNYEPNSYSDAPKENPRYAEP ALSLNGAADRHDHRVDGDYYSQAGKLFNLMSADQQALLIGNIAGAMAGVSSDVVQRQLQHFYKADPAYGEGIARALDVKL G |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 1e-142 | 61 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 1e-110 | 52 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 2e-106 | 49 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 2e-106 | 49 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 2e-106 | 49 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 2e-106 | 49 |
