Gene Information

Name : Psyr_4462 (Psyr_4462)
Accession : YP_237530.1
Strain : Pseudomonas syringae B728a
Genome accession: NC_007005
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD:riboflavin-specific deaminase, C-terminal
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : 1.1.1.193
Position : 5324768 - 5325868 bp
Length : 1101 bp
Strand : -
Note : -

DNA sequence : 
ATGGCGCGAGCACTCGAGCTGGCGCGCAAGGGGCTGTACTCCACGCATCCCAACCCGCGAGTCGGCTGCGTGATCGTGCG
TGAAGGCCGGATCGTTGGCGAAGGCTGGCATGCGCGCGCCGGTGAACCGCATGCCGAAGTGCATGCCTTGCGCCAGGCCG
GCGAGCTGGCCAGAGGCGCGACCGCCTACGTCACCCTCGAGCCGTGCAGTCACCAGGGGCGCACACCGCCCTGTGCCGAT
GCACTGATCGAAGCCGGGCTGACGCGGGTTGTCGCAGCGATGCAGGACCCCAACCCCGAAGTTTCCGGTCGCGGCCTGTT
GCGCCTCATGAATGCCGGCATCGGCGTTCAGTGTGGTGTGCTGGAAAGCGAAGCGCGAGCGCTGAACAAAGGCTTTCTCA
AGCGCATGGAGACCGGCCTGCCGTATGTGCGGGTCAAAATGGCCATGAGCCTGGATGGCCGAACGGCGATGGCCAGCGGG
GAAAGCCAGTGGATCACCGGCCCCGAGGCGCGCTCTGCCGTACAGCGCCTGCGCGCCCAGTCGAGCGTGGTGCTCAGCGG
TGCCGACACGGTGCTGGCCGACAAGGCTCGTCTCACCGTACGCCCTGATGAACTGGGGCTCGATGCCGAATTGACCGCGC
TGGCCGCGGCACGCGCGCCGTTGCGCGTGTTGATCGACGGCCGTTTGCGTGTGCCGCTCGATGCACCGTTCTTCCAGGCA
GGCAGTGCGCTGGTCGTGACCTGCGCTGCTGCGTCGGCGCGAGGCCGCTATCAGGAGGAGGGCCACGAAATGCTCGCGCT
GGCCGACAGCGCCGGTCATGTGGACCTGCGCAGGTTGATGGACGAACTCGCAGCGCGGGGCGTCAATGAAGTGCTGGTCG
AGGCCGGTCCGCGACTGGCGGGGGCTTTTGCGCGGCTCGGGCTGGTCGACGAGTTTCAGCTCTTCATTGCCGGCAAGTTT
CTCGGCTCATCGGCCCGTCCGCTGCTCGATCTGCCACTGGCGCAGATGAGCGAGGCACTGGAACTGAACATTGTGGAAAT
GCGTGCTGTCGGTAATGACTGGCGAGTCATCGCTCTCCCTGTGCGCACACCCGGCGTATAA

Protein sequence : 
MARALELARKGLYSTHPNPRVGCVIVREGRIVGEGWHARAGEPHAEVHALRQAGELARGATAYVTLEPCSHQGRTPPCAD
ALIEAGLTRVVAAMQDPNPEVSGRGLLRLMNAGIGVQCGVLESEARALNKGFLKRMETGLPYVRVKMAMSLDGRTAMASG
ESQWITGPEARSAVQRLRAQSSVVLSGADTVLADKARLTVRPDELGLDAELTALAAARAPLRVLIDGRLRVPLDAPFFQA
GSALVVTCAAASARGRYQEEGHEMLALADSAGHVDLRRLMDELAARGVNEVLVEAGPRLAGAFARLGLVDEFQLFIAGKF
LGSSARPLLDLPLAQMSEALELNIVEMRAVGNDWRVIALPVRTPGV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 1e-62 47
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 1e-62 47