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Name : Psyr_4037 (Psyr_4037) Accession : YP_237105.1 Strain : Pseudomonas syringae B728a Genome accession: NC_007005 Putative virulence/resistance : Virulence Product : YD repeat-containing protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3209 EC number : - Position : 4819501 - 4822368 bp Length : 2868 bp Strand : + Note : - DNA sequence : ATGGTCAGTAGCGCGGTACATGCCCATACGCCGGAGTTGATCGTTTGCGAGGGTCGTGGCCTGGTTGTGCGCCAGGTCCT TTTACATCGAACCGAAGCGACGGAAGCGGCCGCAATGCGGGTTACCCGACAGCGTTTCGACCCGGCAGGCAGAATGATCG CCGCCACTGATCCACGTCTGGCCAGCGCCAACCGGAGCACTGTCTACAGCCTTGGCGGCAACGCGTTGGCCACTGAGAGT GTCGATGCCGGCTGGCAACGGGTGTTATTCGGCGAGGCGGGCCAGGTCTTGCGCGACTGGGATGGTCGCGGCACCGAGAA GCAGCTCGAGTACGACCTGCACCTGCGCCCGACAAGGATCATCGAACAGAATCGGTGTGCGGAGCGGTTCACCTATGGCC AGGCAGGTGCAGCAGCACACAACCAATGCAATCAACTGGTTCGTCATGACGATACGGCGGGCTCGCGCTTGCTGGCAGAT TACGGGCTGCTCGGCGTAGCGCTTTGTGAAGAACGACAGTTCCTGAAAACCCCTGAAAGCCCGGACTGGCCGCTGGCCGA AGCCGAGCGCGATGCCTTGCTTGAGCCTGTCGTGCTGCAAACCTGCTGGCGGTTCAATGCGCTGGGCGACGCGCTTGCGC AGACCGATGCCATGGGCAATACCCAGGCATCAGGCATGACTGTCGCCGGGCAGTTGAAAGCGGCTGAACTGACCCTGACC AATACGGCACAGCCGCAAACGCTGGTCAGTGCAATTCACTATGACGCATTCAACCAGGTCGAGCAGGAGACGGCAGAAAA TGGCGTGGTCAGCCTTTATTCCTATGATCAACAGGACGGCCGACTGACCGGGCTGAGCGCGATATCTGCTGACGGCACGC TGCTGCAGCAACTCAATTACAGCTATGACCCGGTGGGCAATATCCTGCTCGTCAACGATGCGTCTCAACCGGACCGGTAT TGCGACAACCAGCTTATCGAACCGATCAGTCGCTTTGCTTACGACACGCTGTATCAACTGATCGAAGCCAGCGGCCGTGA AGTCCGAAACGGTGCCAGCCATGGCCCCGCGTTGCCCGGGCTGCAATCTCTGCCAACCATCGATCCTTGCCAGGTCAGCA ACTACACGCAGAGTTACAGCTACGACGCTGCGGGTAACCTGCTGCAAATGCGCCACGAAGGCGCGCACAACTTCACCCGC AACATGCACGTTGCACCGGACAGCAATCGCAGCCTGCCCGACGATGACGGGGATGTGGATTTCGCCACGAGTTTTGATGC CAACGGCAATCTGCTGCAGTTGGTACGTGGCCAGGCGCTGCGCTGGAATGCGCGCAATGAGTTGCAGCTGATCACCACTG TTGTACGTGCCGAAGACCCTAATGACAGCGAGACTTACATCTACGACGGCCAAGGCAAGCGCTGCCGCAAGATCACAAGT GCTCAGGCGCACAATCGCACGCTGCTTGACGAAGTGCGCTACTTGCCAGGTCTGGAAATCCGTACCCGCGCCGATGGCGA AATCCTCCATGTCATCACCGCTCAGGCGGGTCGCAATAGTGTGCGAGTGTTGCACTGGGAAGCCGGAAAGCCAGGCGCTA TTGCGAACGATCAGGTGCGTTACAGCCTGGGTGATCATCTGGGCTCGAGCACGCTGGAACTGGATCAGCAAGGCGGCCTG ATCAGCCAGGAAAGTTATTATCCGTTCGGCGGAACGGCCTGGTGGGCGGCGCGCAGCGCAGTGGAAGCGAAGTACAAGAC CGTGCGTTATTCGGGCAAGGAGCGCGACGCCAGCGGGCTTTATTATTACGGGTTCAGGTATTACGCGCCGTGGTTGCAGC GGTGGATCAATCCGGACCCGGCGGGGGATGTGGATGGGTTGAATCTGTTCGGCTTTGTTGGCAACAACCCACTCAACTTA TTTGACCCCGACGGTCAGAGCAGTCAAAAGGCCAGGGCGCGCTGGTTGACGGCGATGGATATCCTGCGCGAGCAAAGGGA TACGAACGACGTGAGTGTCAGAACGCTTGCGCCAGGCGTAATCGGCGTGAGTATCCAGGGCACCAATGAAACCTTCGCGC AAATAGGGATGGGGTTGCCCAGAGCGTTTGAAGGCCGGCGAGAACTTACTTACCTGTCCATCGACTCTACCTACCGGAGC AAGGTTTCAGGAGGCAGCTACCCCTTCGCTATAAAGTCCGCGTCCGGCGCTGCTATTTATGTAGAGGCAGAAGTACCTGG CAGTAGTCACCTGGCATTCATAAATGGCGGCTTCTATAACTTTAAAGGTAGAGCTTCACAATCAGATCCACCACACGCCG CGGTTGGGAAGTTGTTCATGGGTGGCGAGGAGGAAGCATCTGTCAGCATTCCACGGCCTTACGAAAAAGATTACGTTGCG CTGACCATGGGGGATGGCTCCACTCTTCACTCGGCACCACTGCTGTCTACCGGGGGAGAAGTGGCTTTCACCGAAAGCCA TCTTGAGCAGGGAAGGTTTCAATATGGATCGGCCACATCAGGGCCGGGCCAATTAGGTCATGCCAACACGCCCAATCAAC GTTCGGGTATCAGCTTTCCGGTTGTTTTCGACGGATCATCAAGAACGCGTCTGGCCGTCGGGTTAGGCGGAAGCAGAACC CAGGAGTCCAGAGCTTACACGATGCCGGAATGGGCGAAGATCATGGTAAGGCTGGACAAACTGAACGCCACACCTGGATG GTCTGCCAATCTCGACGGCGGCGATAGCGTGGCGCTGGGGATAGTCTCCCGCTCAGGCGAAATCATCATGGATCAATCGG CCAGAGGCAGCCCTCGGCGAGGGATAGGTAACTTCCTGACTTTTTATAAATCCAGTTTTCCAGGGTGA Protein sequence : MVSSAVHAHTPELIVCEGRGLVVRQVLLHRTEATEAAAMRVTRQRFDPAGRMIAATDPRLASANRSTVYSLGGNALATES VDAGWQRVLFGEAGQVLRDWDGRGTEKQLEYDLHLRPTRIIEQNRCAERFTYGQAGAAAHNQCNQLVRHDDTAGSRLLAD YGLLGVALCEERQFLKTPESPDWPLAEAERDALLEPVVLQTCWRFNALGDALAQTDAMGNTQASGMTVAGQLKAAELTLT NTAQPQTLVSAIHYDAFNQVEQETAENGVVSLYSYDQQDGRLTGLSAISADGTLLQQLNYSYDPVGNILLVNDASQPDRY CDNQLIEPISRFAYDTLYQLIEASGREVRNGASHGPALPGLQSLPTIDPCQVSNYTQSYSYDAAGNLLQMRHEGAHNFTR NMHVAPDSNRSLPDDDGDVDFATSFDANGNLLQLVRGQALRWNARNELQLITTVVRAEDPNDSETYIYDGQGKRCRKITS AQAHNRTLLDEVRYLPGLEIRTRADGEILHVITAQAGRNSVRVLHWEAGKPGAIANDQVRYSLGDHLGSSTLELDQQGGL ISQESYYPFGGTAWWAARSAVEAKYKTVRYSGKERDASGLYYYGFRYYAPWLQRWINPDPAGDVDGLNLFGFVGNNPLNL FDPDGQSSQKARARWLTAMDILREQRDTNDVSVRTLAPGVIGVSIQGTNETFAQIGMGLPRAFEGRRELTYLSIDSTYRS KVSGGSYPFAIKSASGAAIYVEAEVPGSSHLAFINGGFYNFKGRASQSDPPHAAVGKLFMGGEEEASVSIPRPYEKDYVA LTMGDGSTLHSAPLLSTGGEVAFTESHLEQGRFQYGSATSGPGQLGHANTPNQRSGISFPVVFDGSSRTRLAVGLGGSRT QESRAYTMPEWAKIMVRLDKLNATPGWSANLDGGDSVALGIVSRSGEIIMDQSARGSPRRGIGNFLTFYKSSFPG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| TccC4 | AAO17196.1 | TccC4 | Virulence | tcd island | Protein | 7e-100 | 42 |
| TccC2 | AAL18492.2 | TccC2 | Virulence | tcd island | Protein | 2e-89 | 41 |
| TccC3 | AAO17204.1 | TccC3 | Virulence | tcd island | Protein | 2e-97 | 41 |
