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Name : Psyr_4033 (Psyr_4033) Accession : YP_237101.1 Strain : Pseudomonas syringae B728a Genome accession: NC_007005 Putative virulence/resistance : Virulence Product : YD repeat-containing protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3209 EC number : - Position : 4804230 - 4807049 bp Length : 2820 bp Strand : - Note : - DNA sequence : ATGAACTCGATCATGCACACCAATACGCCGCAATTGGCGGTCAGCGATTCACGGGCCCTGCCGGTACGCAGTGTGCAGTT CTATCGTGGCGCTGATGATCAGCCTGTTGAAGCCAGGGTGACGCAGCAATATTTCGACAAGGCCGGGCGACTGATCGCCA GTCGCGATCCACGTTTTGCCAGTCGTTTGAAATACGGTGTCTGTGCGCCTGTGAACCTGATGCAAATCGTCAGTTTGTCC GGGGCTTTGCTGCTATCGAAAAGTGTCGACTCAGGTTGGCGGGTGAGCCTCAATGGCGAAGCGGGGCAGTTAGTCGACGG CTGGGACGGACGTGACAACCCGCGCCAGATCGAATACGACGCGCAATTGCGCCCTTTGGCGATCAACGAATCAGGCCGAA TGACCGAGCGCTTCACTTATGGCGGGCCCGCCACTGCTGAGCGTAACCAGTGCAATCAACTGATTCGCCATGACGATACG GCAGGCTCGCGCCTGCTGCAGGACTATGGACTGTCGGGCGGGGTTCTGAGTGAGGAACGGTGTTTCCTGCAGTCGCCTGA CCGCCCGGACTGGCCACTTGCCGAACCTGATCGTGATGCACTGCTGGAGCCCGTCGGCCTGCAGACACGCCGGGCTTTCA ACGCGCAGGGCGAAGCGCTGGCGCAGACTGACGCCAACGGTAACGTCCAGCGTTTCAGTTACGGTGCGGCGGGGCAACTG CACGCTGTTGAACTGACCCTGACCAATACGGAACAGCCGCAAACGCTGGTCAGTGCAATTGACTATGACGCATTCAACCA GGTCGAGCAGGAGACGGCAGGAAATGGCGTGGTCAGCCGCTATGTGTATGATCTACAGGACGGTCGGCTGATTGAACTCA GTGCGCTATCTGCTGACGGCTCAGTGCTGCAAAAACTGAATTACAGCTATGACCCGGCAGGTAACGTTCTACTCATCAAC GATGCCTCGCAGCCAGACCGGTATTGCGGCAATCAGCGTATCGAGCCGATAAACCGCTACTGTTACGACACGTTGTATCA GTTGATCGAAGCCACGGGTCGTGAGGTCAGAAACGGTGCCAGTCATGGTCCGGCGCTGCCCGGTCTGCAACCTGTCCCGA CGCTCGATCCTTGCCAGGTCAGCAACTACAGACAGCATTACAGCTACGACCCTGCGGGTAACCTGCTGCAAATGCGCCAC GAAGGCGCACACAACTTCACCCGCAACATGCACGTTGCACCGGACAGCAATCGCAGCCTGCCCGACGATGACGAGGATGT GGATTTCGCCACGAGTTTTGATGCCAACGGCAACCTGCTGCAACTGGTGCGTGGTCAGGTTATGGGTTGGGATGTGCGTA ACCAGTTGCAGCACATCACCACTGTGCAACGTGAAGACGGGGCGAACGATGACGAACGCTATGTCTATGACGGCCAGGGT CAGCGTTGCCGCAAGATCAGCACCGCGCAGGCATCAGGTCGCACGCTGAGCAACGAAGTGCGCTACCTGCCGGGGCTGGA AATCCGGACCACGGCGAGTGGGGAAATTCTCCACGTCGTTATCGCTCAGGCGGATCGCAACAACGTGCGGGTGCTGCACT GGGAAGCGGGAAAACCAGATGCCATTGCGAACGACCAGGTGCGCTACAGCCTGGGTGATCATTTGGGCTCAAGCACGCTG GAGCTTGATCAGCAAGGCGGCCTGATCAGCCAGGAAAGTTATTATCCGTTCGGCGGTACGGCCTGGTGGGCGGCGCGCAG TGCAGTGGACGCCAAGTACAAAACAGTTCGGTACTCGGGTAAAGAGCGCGATGCCAGTGGGCTTTATTACTACGGGTTCA GGTATTACGCGCCGTGGTTGCAGCGGTGGATCAATCCTGACCCGGCGGGGGCTGTAGATGGGTTGAATCTTTATGCAATG GTTGGGAATAGTCCGTTACGAAATAAAGATATAGCGGGTTTGCAACATCGACCTTATCAGGGCTTTCAAGACGCTTACGA GCAGCAGGCCAGTTCAAGTGGCCTCACCCTCATCGCTCGAGGCAGAGAAAATATAAAACTGTTGAAGAAGCCTCCGACAG ATAAGCTGGGTCATGCCCTTGAGGTTGTTGAAGTGGCCTATAAGGAGAGTCAGCGTGTTTTTAATAGCGGAGATTTAACT GAAACGCAAAAAGTCGTCGTCTGGAATGTCATGGGGTATACATCACTGGCACAAATGCCCGAAATGGCCAGTCAGTACGC GAGTTTGAACGACGTGGTGCAGGATTATACGGCAGGGCACGGGTTTAATCAGTTTGCCGTCTTTGGCAGGCAGCCAGGTA CTCAGGGTCTTACCTTTTCAAACGACCCACACAAAAGAATATTTTTAGGGCGGGAGGTATTGGATTTTCATGTGCTGGGA ACCGCGCTGGTAATGGGCCATGAAATTTCCCATACCACGCAGAGGCGTTCGAAGGATTACATTTATATGAATGCGAACGT CAATCGGGATGAAGGTGTTGAGCAGTTAACACCAGGTGACGTGGATGAGCATTTGCAGAGCATGTTAGAGTCGGCAAGTC ATGTCACAGCAGGGCAGCATGACCACGTCATATTTTCGAATATTGATAGCATGATTCGCGAAGGTAAACTGACGGCAGAT GATGTAACAAGTCTGTTTGCAACCCGTAGTCTTCAAGATATCCACGTTAACCGCTTAACGTACCCGGGTGTCAGGGACCG CATCCTGCGTAATAATGCAGATAATATTGCATTTTTAGGGCTTTTTCTCGGAAGAGAGCAGGTTGTTTCAAAAATGAAGG CGCGAGGCTATGTTAAGTAG Protein sequence : MNSIMHTNTPQLAVSDSRALPVRSVQFYRGADDQPVEARVTQQYFDKAGRLIASRDPRFASRLKYGVCAPVNLMQIVSLS GALLLSKSVDSGWRVSLNGEAGQLVDGWDGRDNPRQIEYDAQLRPLAINESGRMTERFTYGGPATAERNQCNQLIRHDDT AGSRLLQDYGLSGGVLSEERCFLQSPDRPDWPLAEPDRDALLEPVGLQTRRAFNAQGEALAQTDANGNVQRFSYGAAGQL HAVELTLTNTEQPQTLVSAIDYDAFNQVEQETAGNGVVSRYVYDLQDGRLIELSALSADGSVLQKLNYSYDPAGNVLLIN DASQPDRYCGNQRIEPINRYCYDTLYQLIEATGREVRNGASHGPALPGLQPVPTLDPCQVSNYRQHYSYDPAGNLLQMRH EGAHNFTRNMHVAPDSNRSLPDDDEDVDFATSFDANGNLLQLVRGQVMGWDVRNQLQHITTVQREDGANDDERYVYDGQG QRCRKISTAQASGRTLSNEVRYLPGLEIRTTASGEILHVVIAQADRNNVRVLHWEAGKPDAIANDQVRYSLGDHLGSSTL ELDQQGGLISQESYYPFGGTAWWAARSAVDAKYKTVRYSGKERDASGLYYYGFRYYAPWLQRWINPDPAGAVDGLNLYAM VGNSPLRNKDIAGLQHRPYQGFQDAYEQQASSSGLTLIARGRENIKLLKKPPTDKLGHALEVVEVAYKESQRVFNSGDLT ETQKVVVWNVMGYTSLAQMPEMASQYASLNDVVQDYTAGHGFNQFAVFGRQPGTQGLTFSNDPHKRIFLGREVLDFHVLG TALVMGHEISHTTQRRSKDYIYMNANVNRDEGVEQLTPGDVDEHLQSMLESASHVTAGQHDHVIFSNIDSMIREGKLTAD DVTSLFATRSLQDIHVNRLTYPGVRDRILRNNADNIAFLGLFLGREQVVSKMKARGYVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| TccC3 | AAO17204.1 | TccC3 | Virulence | tcd island | Protein | 6e-100 | 41 |
