Gene Information

Name : Psyr_4029 (Psyr_4029)
Accession : YP_237097.1
Strain : Pseudomonas syringae B728a
Genome accession: NC_007005
Putative virulence/resistance : Virulence
Product : pyruvate kinase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0469
EC number : 2.7.1.40
Position : 4796791 - 4798242 bp
Length : 1452 bp
Strand : +
Note : catalyzes the formation of phosphoenolpyruvate from pyruvate

DNA sequence : 
ATGACCGTTCGCCGCACCAAAATCGTCGCCACACTTGGCCCTGCCAGCAACTCGCCGGAAGTCATCGAACAACTGATCCT
TTCGGGTCTGGACGTTGCTCGTCTGAACTTCTCTCACGGTACTCCGGACGAGCACAAGGCTCGCGCCAGGCTGATCCGCG
AAATCGCCGCCAGACACGGGCGCTTCGTCGCTCTGCTGGGCGACCTGCAGGGTCCGAAGATTCGTATCGCAAAGTTCACC
GACAAGCGAATAGAGCTGAAGGTCGGTGACAAGTTCACCTTCTCCACTGCTCATCCGCTGACCAGTGGCAACCAGCAGAT
CGTGGGTATCGATTACCCGGATCTGGTCAAGGATTGCGGCGTAGGCGACGAGTTGCTGCTCGACGATGGTCGCGTGGTCA
TGCGCGTCGACACCCAGACCGCTGACGAACTGCACTGCACCGTGCTGATCGGTGGTCCGCTGTCCGACCACAAAGGCATC
AACCGTCGTGGTGGTGGCCTGACGGCGCCAGCACTGACCGAAAAAGACAAGCAGGACATCAAGCTCGCTGCCGAGATGGA
CCTGGACTACCTGGCCGTTTCCTTCCCGCGCGACGCCGCCGACATGGAATACGCCCGCCAGTTGCGCGACGAATCCGGTG
GTACGGCCTGGCTGGTGGCCAAGATCGAACGTGCCGAAGCCGTTGCCAACGACGAAGTGCTGGATGAGCTGATCCGCGCC
AGTGACGCGGTCATGGTCGCTCGTGGTGACCTGGGTGTCGAAATCGGTGATGCCGAACTGGTCGGCGTACAGAAACGCAT
CATCCTGCACGCCCGTCGCCACAACAAGGCGGTGATCGTCGCCACGCAGATGATGGAGTCGATGATCTCCAGCCCCATGC
CGACGCGTGCCGAAGTGTCCGACGTGGCCAACGCCGTGCTCGACTACACCGACGCCGTGATGCTGTCGGCCGAAAGTGCT
GCAGGCTCCTACCCGATCGAAGCGGTTCAGGCCATGGCCCGTATCTGCATCGGTGCTGAAAAGCACCCGACCGGCAAGAC
GTCCAGCCACCGCATCGGTCACTCGTTCACCCGTTGTGACGAAAGCATCGCGCTGGCGGCCATGTACACCGCCAACCACT
TCCCGGGTGTGAAGGCGATCATCGCACTGACCGAAAGCGGCTACACCCCGCTGATCATGTCGCGCATCCGCTCCTCGGTG
CCGATCTACGCGTTCTCTCCGCACCGTGGTACTCAGGCGCGTGCTGCGATGTTCCGTGGCGTCTACACCGTGCCATTCGA
CCCGGCAGCGCTGCCGCCAGGTCAGGTCAGCCAGGCCGCAGTCGACGAACTGCTCAAGCGTGGTCTGGTCGAGCAAGGTG
ACTGGGTCATCCTCACCAAGGGCGACAGCTACCACACCATCGGCGGCACCAACGGCATGAAGATTCTGCACGTCGGCGAC
CCGTTGGTCTGA

Protein sequence : 
MTVRRTKIVATLGPASNSPEVIEQLILSGLDVARLNFSHGTPDEHKARARLIREIAARHGRFVALLGDLQGPKIRIAKFT
DKRIELKVGDKFTFSTAHPLTSGNQQIVGIDYPDLVKDCGVGDELLLDDGRVVMRVDTQTADELHCTVLIGGPLSDHKGI
NRRGGGLTAPALTEKDKQDIKLAAEMDLDYLAVSFPRDAADMEYARQLRDESGGTAWLVAKIERAEAVANDEVLDELIRA
SDAVMVARGDLGVEIGDAELVGVQKRIILHARRHNKAVIVATQMMESMISSPMPTRAEVSDVANAVLDYTDAVMLSAESA
AGSYPIEAVQAMARICIGAEKHPTGKTSSHRIGHSFTRCDESIALAAMYTANHFPGVKAIIALTESGYTPLIMSRIRSSV
PIYAFSPHRGTQARAAMFRGVYTVPFDPAALPPGQVSQAAVDELLKRGLVEQGDWVILTKGDSYHTIGGTNGMKILHVGD
PLV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pykA NP_273151.1 pyruvate kinase Not tested IHT-A Protein 2e-72 44
pykF CAA68205.1 pyruvate kinase like protein Not tested SPI-2 Protein 3e-57 44
STY1744 NP_456147.1 pyruvate kinase Not tested SPI-2 Protein 7e-58 44
pykF YP_216386.1 pyruvate kinase Not tested SPI-2 Protein 7e-58 44
pykF NP_805051.1 pyruvate kinase Not tested SPI-2 Protein 7e-58 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psyr_4029 YP_237097.1 pyruvate kinase VFG0479 Protein 3e-58 44