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Name : ddl (Psyr_3919) Accession : YP_236987.1 Strain : Pseudomonas syringae B728a Genome accession: NC_007005 Putative virulence/resistance : Resistance Product : D-alanyl-alanine synthetase A Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1181 EC number : 6.3.2.4 Position : 4661904 - 4662995 bp Length : 1092 bp Strand : - Note : D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli DNA sequence : TTGAAAAAGTCAGTCGCCATCGTTTTTGGTGGGCAATCCAGCGAGCATGAGGTTTCGTTGCAGTCGGCACGCAACGTGAT CAATGCGATTGATCGTGAACGCTATGCACTGACCCTGATCGGCGTCGACAAGCTGGGCCGCTGGCTGCATTTCGACGAAG CCGATTACCTGCTTAATGCCACTGATCCTGCACGGATCAAACTAAGCGCATCAGGCAAGCCATTGTCCTTGCTGCCGGGC AGTATCGGCGGGCAGTTTGTCGACGTCGAGTCAGGCCAGCCACTGGCAGCCATCGATGTGGTATTCCCGCTGATCCACGG CGCTTTTGGTGAAGACGGCGCGTTGCAGGGTCTGCTGCGCATGCTGTCCGTGCCTTTTGTCGGCGCCGATGTGCTGTCCT CTGCGGCCTGCATGGACAAGGACGTGACCAAGCGTCTGCTGCGCGATGCGGGCATTGCCGTCGCGCCGTTCAGGGTCCTG TCGCGTGGAGAGAGCCTTTCTTTCACGGAGGCTGCCGACCAGTTGGGGCTGCCGATGTTCGTCAAGCCGGCCAACCAGGG TTCATCGGTGGGCGTGAGCAAGGTGTCTGACGAGGCCGGTTTCGCGGCAGCACTGGCGCTGGGTTTCGAGTTCGATCACA AGCTGCTGATCGAGCAGGGCATCGTTGGCCGGGAAGTGGAGTGCGCGGTATTGGGTAACTTCGATGCGCAGGTCAGTGTC TGTGGCGAAGTGATTGCCAACGATGAATTCTATGCCTACGACACCAAGTACCTGAATGGCGATCAGGCACGCATCGCCAT TCCCGCCGAGCTGCCCGCCGACCTGAGTGATCAGGTGCGTGACGTCGCGTTGCAGGCGTACAAGGTGCTGGGCTGCGCAG GGCTCTCGCGGGTCGATTTCTTCGTCACCGAAGGGCGCGACATCATCATCAACGAGGTCAACACGCTGCCGGGCTTCACC TCGATCAGCATGTACCCCAAGCTCTGGCAGGCCAGCGGTCTGTCGTATGCCGAACTGATCCATCGCCTGATCGTTCTGGC GCTGGAACGGGCTGATCAGGCGCGGCTGCTGAAAACGGAGATCTTTCCATGA Protein sequence : MKKSVAIVFGGQSSEHEVSLQSARNVINAIDRERYALTLIGVDKLGRWLHFDEADYLLNATDPARIKLSASGKPLSLLPG SIGGQFVDVESGQPLAAIDVVFPLIHGAFGEDGALQGLLRMLSVPFVGADVLSSAACMDKDVTKRLLRDAGIAVAPFRVL SRGESLSFTEAADQLGLPMFVKPANQGSSVGVSKVSDEAGFAAALALGFEFDHKLLIEQGIVGREVECAVLGNFDAQVSV CGEVIANDEFYAYDTKYLNGDQARIAIPAELPADLSDQVRDVALQAYKVLGCAGLSRVDFFVTEGRDIIINEVNTLPGFT SISMYPKLWQASGLSYAELIHRLIVLALERADQARLLKTEIFP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| vanB | YP_008394259.1 | Vancomycin B-type resistance protein vanB, D-alanine--D-lactate ligase | Not tested | Not named | Protein | 3e-50 | 42 |
| vanB | NP_815951.1 | D-alanine--D-lactate ligase | Not tested | Not named | Protein | 4e-48 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ddl | YP_236987.1 | D-alanyl-alanine synthetase A | U00456.gene.p01 | Protein | 2e-48 | 41 |
| ddl | YP_236987.1 | D-alanyl-alanine synthetase A | AY145441.gene.p01 | Protein | 5e-49 | 41 |
| ddl | YP_236987.1 | D-alanyl-alanine synthetase A | U35369.1.gene6.p01 | Protein | 2e-48 | 41 |
| ddl | YP_236987.1 | D-alanyl-alanine synthetase A | AE016830.1.gene2250. | Protein | 2e-48 | 41 |
| ddl | YP_236987.1 | D-alanyl-alanine synthetase A | AF310956.2.orf5.gene | Protein | 4e-49 | 41 |
