Gene Information

Name : Psyr_3811 (Psyr_3811)
Accession : YP_236880.1
Strain : Pseudomonas syringae B728a
Genome accession: NC_007005
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 4532460 - 4532759 bp
Length : 300 bp
Strand : -
Note : -

DNA sequence :
ATGACTAAGCCCAAGACAGATCGCGTTAAATACACCCTTGAGTTCAAACTTGAGGCCGTGCGACTGGTCGATACAGGCCT
GACGCTTGCTGCCGCTGCCCGCTCTCTGGGTATATCCGACCAGACCTTGTTCAACTGGGTCAAGGCGCATCGCCAAGGCA
GGCTGACCGGCGCTGACATCAAGTCTGTCACTCCCGAGCAGATGGAGATAAGCCGTCTACGAGCCGAGCTGGCACGCGTC
AAGATGGAGCGCGACATTCTGGAAAAGGCGACGGCGTACTTCGCAAAAGCATCCAGCTGA

Protein sequence :
MTKPKTDRVKYTLEFKLEAVRLVDTGLTLAAAARSLGISDQTLFNWVKAHRQGRLTGADIKSVTPEQMEISRLRAELARV
KMERDILEKATAYFAKASS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
RS05 AAP82950.1 putative transposase Not tested PAPI-2 Protein 2e-07 44
tnpJ AAD44752.1 TnpJ Not tested SHI-2 Protein 3e-12 43
unnamed AAQ07469.1 TnpJ-like protein Not tested Not named Protein 3e-12 43
hp2 AAC61714.1 Hp2 Not tested PAI I CFT073 Protein 3e-12 43
c3576 NP_755451.1 hypothetical protein Not tested PAI I CFT073 Protein 5e-12 43
unnamed AAF09021.1 unknown Not tested SHI-O Protein 8e-12 42
unnamed AAF09029.1 unknown Not tested SHI-O Protein 8e-12 42
l7045 CAD33744.1 - Not tested PAI I 536 Protein 1e-09 42
orfA CAE85179.1 OrfA protein, IS911 Not tested PAI V 536 Protein 1e-09 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psyr_3811 YP_236880.1 transposase IS3/IS911 VFG1707 Protein 1e-12 43
Psyr_3811 YP_236880.1 transposase IS3/IS911 VFG1485 Protein 5e-10 42