Gene Information

Name : Psyr_3743 (Psyr_3743)
Accession : YP_236812.1
Strain : Pseudomonas syringae B728a
Genome accession: NC_007005
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 4459220 - 4459888 bp
Length : 669 bp
Strand : +
Note : -

DNA sequence : 
ATGCTGCAAGTGCGAAACGTATTCAAGCGCTACACCACGGCACAGGGACCGCTGGATGTCTTGCGTGGTGTTGATCTGCA
TCTGGCACAGGGCGAAAGCCTGGCGTTGATGGGTGAATCCGGCAGTGGCAAGAGCACCTTGCTGCATCTGGTGGCAGGCC
TGGATCAGGTCGACGATGGCAGCATCGAGGTCGCAGGCCAGCGTCTGGACCTGATGAACGAAAGCCAGCTGGCCAACTGG
CGGCGTACCGAAATCGGTCTGGTGTTTCAGCAGTTCAACCTGATCGGCAGCCTGAAAATAGCCGACAACCTGGCGTTTCA
GGCACGCTTGGCCGGGCGTGTTGATGCGGATTGGCAGGCGCATTTGATCGAGCGCCTGGGTCTGGGGGCTTTGCTGGATC
GCTACCCCGAACAACTCTCCGGCGGACAGCAGCAGCGTGTAGCGATAGGCCGCGCCCTCGCCTCCCGACCCGGCCTGCTG
CTGGCTGACGAACCCACCGGCAATCTCGACGAAGCCACCAGCGACGAGGTACTGCAACTGCTGCTGGATATCCTCACCGA
CAGCCCTACCAGCCTGCTGATGGTCACCCACAGCCCGCGCGTCGCGCAGCGCCTGTCGCGCAAAGTGGTGCTGCATCTGG
GGCGTCTGGCTGACGAAGGCGAGCGCTGA

Protein sequence : 
MLQVRNVFKRYTTAQGPLDVLRGVDLHLAQGESLALMGESGSGKSTLLHLVAGLDQVDDGSIEVAGQRLDLMNESQLANW
RRTEIGLVFQQFNLIGSLKIADNLAFQARLAGRVDADWQAHLIERLGLGALLDRYPEQLSGGQQQRVAIGRALASRPGLL
LADEPTGNLDEATSDEVLQLLLDILTDSPTSLLMVTHSPRVAQRLSRKVVLHLGRLADEGER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-34 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-34 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-34 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psyr_3743 YP_236812.1 ABC transporter NC_008702.1.4606598. Protein 4e-30 42
Psyr_3743 YP_236812.1 ABC transporter CP001581.1.gene798.p Protein 3e-37 41