Gene Information

Name : Psyr_3511 (Psyr_3511)
Accession : YP_236581.1
Strain : Pseudomonas syringae B728a
Genome accession: NC_007005
Putative virulence/resistance : Virulence
Product : response regulator receiver:transcriptional regulatory protein, C-terminal
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4185924 - 4186586 bp
Length : 663 bp
Strand : +
Note : -

DNA sequence : 
ATGCGCCTGCTTCTCGTCGAGGATGATCGAGCCATTGGTCAGGGCATCCGCGTGGCCCTGAATACCGAGGGCTATACCCT
CGACTGGCTGGAGGACGGACTGAGCGCGCTGCACGCTTTGCGCAGCGAGCCATTCGACCTGTTGCTGCTCGACCTCGGCC
TGCCGCGCCTGGATGGCCTGGACCTGCTGCGCCAGTTGCGCGCCGAAGCACTCACCCTGCCGGTGCTGATCCTGACCGCG
CGCGACGGGACTGCCGACCGTATTGCCGGTCTGGATGCCGGTGCGGACGATTACCTGATCAAGCCATTCGACGTCGATGA
ACTGAAAGCCCGGGTCCGCGCCCTGCTCAGGCGCAGCCAGGGCCGTGCGCAACCGCTGCTGGAACATGCCGGCATCAGCC
TCGATCCGGCGTCGCAGCAGGTCAGTTTCCAGGGCAGCGAAGTACCGATGACGCCCATGGAGTACCAGTTGCTGCATCAA
CTGATGATCCGCCCCGGCAAGGTGGTCACCCGCGAGCGCTTGTCCAATACCCTGTACGGTTGGCAGGACAAGGTCGAAAG
CAACACGCTGGAGGTACTGATTCACAACCTGCGCAAGAAACTGTCCACCGAGCTGATCCGCACCGTGCGCGGCGTCGGTT
ACCTGCTGGAGCTCAAGGCATGA

Protein sequence : 
MRLLLVEDDRAIGQGIRVALNTEGYTLDWLEDGLSALHALRSEPFDLLLLDLGLPRLDGLDLLRQLRAEALTLPVLILTA
RDGTADRIAGLDAGADDYLIKPFDVDELKARVRALLRRSQGRAQPLLEHAGISLDPASQQVSFQGSEVPMTPMEYQLLHQ
LMIRPGKVVTRERLSNTLYGWQDKVESNTLEVLIHNLRKKLSTELIRTVRGVGYLLELKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-31 47
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-21 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psyr_3511 YP_236581.1 response regulator receiver:transcriptional regulatory protein, C-terminal BAC0197 Protein 1e-29 43
Psyr_3511 YP_236581.1 response regulator receiver:transcriptional regulatory protein, C-terminal CP001918.1.gene5135. Protein 2e-20 42
Psyr_3511 YP_236581.1 response regulator receiver:transcriptional regulatory protein, C-terminal AE015929.1.gene1106. Protein 5e-21 41
Psyr_3511 YP_236581.1 response regulator receiver:transcriptional regulatory protein, C-terminal BAC0638 Protein 2e-19 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psyr_3511 YP_236581.1 response regulator receiver:transcriptional regulatory protein, C-terminal VFG0473 Protein 4e-37 50
Psyr_3511 YP_236581.1 response regulator receiver:transcriptional regulatory protein, C-terminal VFG1390 Protein 9e-30 44
Psyr_3511 YP_236581.1 response regulator receiver:transcriptional regulatory protein, C-terminal VFG0596 Protein 6e-22 42