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Name : Psyr_3406 (Psyr_3406) Accession : YP_236476.1 Strain : Pseudomonas syringae B728a Genome accession: NC_007005 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : N : Cell motility COG ID : COG0840 EC number : - Position : 4066069 - 4067634 bp Length : 1566 bp Strand : + Note : - DNA sequence : ATGCGCAACAACCAACCCATCACTCAACATGAGCGGACATTTCCTGCCGAACAACGACTGATTTCCACCACCGACACCCG AGGCACCATCACCTATTGCAATGATGCCTTCGTCGACATCAGTGGTTACAGCGAGGCTGAATTGCTGGGTGCGGCGCACA ACACCGTGCGTCATCCGGATGTACCGCCTGCGGTATTCGAGCACATGTGGACCACGCTCAAGTCCGGGCAGCCGTGGATG GGCATCGTCAAGAACCGCTGCAAGAACGGCGATCATTATTGGGTCAATGCCTACGTGACGCCGGTGCTGGAAAACCGCCA GGTAGTGGGTTTCGAGTCGGTACGCATCAAGCCGACCGCCGAACAGGTCCGCCGTGCCGAGGCGCTTTATACCCGGCTCA ACAAGGGCAAGAGCGCGGTACCAGGCCGCGACAAGTGGCTGCCGGTACTTCAGGACTGGTTGCCGTTCATTCTGGTCAGC CAGCTGAGCTTTCTGATCGGGGTGTGGCTCAATTCACATTGGGGGTTTGCCCTGGCTGCGGCATTGTCGGTACCGCTGGG CCTGCTGGGGCTTTCCTGGCAGCAGCGTGGCACCAAACGCTTGTTGCGCCTGGCCGAACAGACCACGTCCGACCCGTTGA TCGCGCAGATGTACACCGACAGCCGTGGGCCGCAAGCGCGCCTGGAAATGTCGATCCTCAGCCAGGAAGCGCGCATGAAA ACCTGCCTGACGCGTTTGCAGGACACGGCCGAACACCTGAACAGTCAGGCCCGCCAGTCCAACTCGCTGGCCAATGCCAG TTCGATCGGGCTGGAACGTCAGCGTGTGGAGACCGAGCAGGTTGCCGCCGCCATCAACCAGATGGCCGCCACCACTCAGG AAGTCGCCAGCCACGTTAACCGTGCCGCTGATGCCACCCAGCAGGCCAACGAACTGACGCGTCGCGGGCGCGATATCGCC GGTGAAACCCGCGAAGCCATTCAGCGCCTGTCCACCTCGGTGGGCGAAACCGGCCTGACCGTGACCCGCCTGGCCAAGGA CAGCGATGAAATCGGTGGCGTGGTCGATGTGATCAAAGGCATTGCCGACCAGACCAACCTGCTGGCCCTCAACGCCGCGA TCGAAGCGGCGCGCGCCGGTGAGATGGGTCGCGGCTTTGCCGTCGTGGCAGATGAAGTACGCCAGCTGGCACAACGCACC GCCGAGTCCACCGGGCAGATTCATGGCCTGATCGCCAAACTGCAGCAGACCGCAACCGACGCGGTACACACCATGGACAC CGGTCGCCGTCAGGCCGAAGAAGGCGTAGCCCGGGTACTGGAGGCAGATCAGGCGCTGGTGGGCATCAGCGAGGCTGTCG CCAATATTACCGACATGACCACGCAAATCGCCACCGCCACGGAAGAGCAAAGCGCCGTGGCCGAGGAAATCAATCGCAAC ATCGCCACCATCGCCAGCCTGGCAGACCAGACCTCTGACGAAGCGCGTCGCTCTGCCGTATTGAGTGGCGAACTGACCGA CACGGCCAACTCACAGTATTCGCTGGTAGAGCGGTTTAATCGCTAA Protein sequence : MRNNQPITQHERTFPAEQRLISTTDTRGTITYCNDAFVDISGYSEAELLGAAHNTVRHPDVPPAVFEHMWTTLKSGQPWM GIVKNRCKNGDHYWVNAYVTPVLENRQVVGFESVRIKPTAEQVRRAEALYTRLNKGKSAVPGRDKWLPVLQDWLPFILVS QLSFLIGVWLNSHWGFALAAALSVPLGLLGLSWQQRGTKRLLRLAEQTTSDPLIAQMYTDSRGPQARLEMSILSQEARMK TCLTRLQDTAEHLNSQARQSNSLANASSIGLERQRVETEQVAAAINQMAATTQEVASHVNRAADATQQANELTRRGRDIA GETREAIQRLSTSVGETGLTVTRLAKDSDEIGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRT AESTGQIHGLIAKLQQTATDAVHTMDTGRRQAEEGVARVLEADQALVGISEAVANITDMTTQIATATEEQSAVAEEINRN IATIASLADQTSDEARRSAVLSGELTDTANSQYSLVERFNR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0512 | NP_230163.1 | methyl-accepting chemotaxis protein | Not tested | VSP-2 | Protein | 4e-74 | 41 |
