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Name : Psyr_3151 (Psyr_3151) Accession : YP_236221.1 Strain : Pseudomonas syringae B728a Genome accession: NC_007005 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 3775147 - 3776904 bp Length : 1758 bp Strand : - Note : - DNA sequence : ATGTCCCTCCGAAGTAGCAAAATGCCCTCATTCATGCCGTCAGCTCCCGTCGATGTTTCCCGTCTGCTCATTCCGGATGC CCAGCAGGTTTGTGCCTGGCTGATCGAAAATGCCGGTCTGAAAACGGCCGATCTGGAGCGCGCCCAGCGTCTGCAGCAGG AGTCGGAAGGTACTGAGTTGCTAGGCCTGCTGACGCGTCTGGGCCTGGTCTCCGAATTCGAGCTGGCCCGCGCATGGGCG GCATTGCTGCAGGCACCGTTGTTGCTCGCCGATGCTGTACCACCGCTGCTGGACCCTTTGCCGCCGCTGACCGAACGCTT CATGCGCCACTATCAAGTCGTACCGGTAGGCTGGAGCGATCAGGGCCTGCAAGTGCTCAGCGCCAACCCCGGCACGCTGT ACCCGTTTCAGGCCATCGCCTATGCGTGCGAGGTGCCGGTGCGACTGTCCATCGGCCCGCGCAATGAGGTCGAGACCCTT ATCGAGCGCTATTACGGGCAGGGCCGCTCGGCGATGGGCACCCTGATCGAGAATCTGGATGAGGAGGGCGGCTCGCTGGA AGACATCGAGCACCTCAAGGACCTGGCCTCCGAAGCGCCGGTCATTCGTCTGGTCAACCTGATCCTGCAGCGTGCAGTAG AGCAGCGTGCATCGGACATCCACATCGAACCGTTCGAGAGCCAGTTGAAGGTGCGTTATCGCATCGACGGCGTGCTGCAC GAAGCGGAAGCGCCGCCATCCAGTTCTTCGGCAGCGGTGATTTCCCGGGTGAAGATCATGGCCCGCCTGGACATCGCCGA GCGTCGTCTGCCGCAGGATGGCCGGATCATGCTGCGCATCCAGGGCAAGGAACTGGACCTGCGGGTATCGACAGTGCCCA CCAGCTTTGGCGAATCAGTGGTCATGCGTCTGCTGGACCGGCAGACCATCAATTTCGATTTCCCGAGCCTGGGTTTCGAT GGCGAGCGGCTGGACGAATTTCTCGACGTGCTGGAGCGTCCGCACGGCATTCTGCTGGTCACCGGGCCGACCGGTTCCGG CAAGACCACCACGCTGTATACCGCGTTGTCACGGCTCAACACGGCCGAGCGCAAGATCATCACCGTTGAAGACCCGGTCG AGTATCAGCTCGAAGGTATCAACCAGATTCAGGTCAAGCCTTCCATCGGCCTGGATTTCGCCGGGGCGCTGCGCTCCATC GTGCGTCAGGACCCGGATGTCATCATGATCGGTGAGATGCGCGACCTGGAAACCTGCCGTATTGCCATCCAGTCCTCGTT GACCGGACACCTGGTGCTCTCGACGCTGCACACCAACAGCGCAGCGGCGAGTATTACCCGCTTGCTGGACATGGGCGTCG AAAGCTATCTGATCGCTTCGACGGTCAACGGAATTCTGGCTCAGCGTCTGGTCCGTCGCCTCGATCCGGCAACCCGCGAG GCCTTCGATGCGCCACCGGAGCTGATCGCCGAACACGGGCTGGAGCGTTTCACCGACGAGCGGCCCATTCGTTTGTATCG CCCGCGTGCCGATGCGCCTGGCGGCGGCTATCGCGGGCGTAGTGCAATTACCGAACTGCTGGTGATGAACGAAGAACTGC GCAGTCTTTTGATGCGCCACGCCGACGCCTCGACGCTGGAAGAGGCTGCCCGACGTGGCGGTTTGCGCACGCTGCATGAA GAAGGCCTGCGTCAGGCCGTGGCCGGGGTGACTTCGCTGGAAGAAGTGCTGCGCGTCACCCGTGGTGAAGGCACATGA Protein sequence : MSLRSSKMPSFMPSAPVDVSRLLIPDAQQVCAWLIENAGLKTADLERAQRLQQESEGTELLGLLTRLGLVSEFELARAWA ALLQAPLLLADAVPPLLDPLPPLTERFMRHYQVVPVGWSDQGLQVLSANPGTLYPFQAIAYACEVPVRLSIGPRNEVETL IERYYGQGRSAMGTLIENLDEEGGSLEDIEHLKDLASEAPVIRLVNLILQRAVEQRASDIHIEPFESQLKVRYRIDGVLH EAEAPPSSSSAAVISRVKIMARLDIAERRLPQDGRIMLRIQGKELDLRVSTVPTSFGESVVMRLLDRQTINFDFPSLGFD GERLDEFLDVLERPHGILLVTGPTGSGKTTTLYTALSRLNTAERKIITVEDPVEYQLEGINQIQVKPSIGLDFAGALRSI VRQDPDVIMIGEMRDLETCRIAIQSSLTGHLVLSTLHTNSAAASITRLLDMGVESYLIASTVNGILAQRLVRRLDPATRE AFDAPPELIAEHGLERFTDERPIRLYRPRADAPGGGYRGRSAITELLVMNEELRSLLMRHADASTLEEAARRGGLRTLHE EGLRQAVAGVTSLEEVLRVTRGEGT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 4e-91 | 45 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 3e-91 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Psyr_3151 | YP_236221.1 | type II secretion system protein E | VFG0182 | Protein | 3e-91 | 50 |
| Psyr_3151 | YP_236221.1 | type II secretion system protein E | VFG2048 | Protein | 2e-92 | 45 |
| Psyr_3151 | YP_236221.1 | type II secretion system protein E | VFG1876 | Protein | 2e-85 | 44 |
| Psyr_3151 | YP_236221.1 | type II secretion system protein E | VFG0112 | Protein | 1e-85 | 41 |
| Psyr_3151 | YP_236221.1 | type II secretion system protein E | VFG1880 | Protein | 4e-82 | 41 |
