Gene Information

Name : Psyr_3096 (Psyr_3096)
Accession : YP_236166.1
Strain : Pseudomonas syringae B728a
Genome accession: NC_007005
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 3711664 - 3712455 bp
Length : 792 bp
Strand : +
Note : -

DNA sequence : 
ATGAACGCCTTACCCCATTCGCTCAATGCACCGGTGCTCGGTTGTGCCGGTCTGGGTTATTCGGTACGTGGCGCAGCGCT
GCTGCGCGATGTCGACCTGAGCATTGCCGCCGGTGAAACCCTGGCCGTGGTCGGTCCCAACGGCTCGGGCAAATCCACCC
TGCTCAAGCTGTTGGCCGGTATTCAGAAGCCGGTCAGCGGCTCGGTCAGCCTGGACGGGCAAGCACTTGAAGCGTTGAGC
CGCAGGGACGTGGCGCGCCTGCTGGCGGTGGTCGAGCAGCAGGCTGAAACCAGCGACGCCGTGACCGTGCTGGATGCCGT
CGAACTGGGCCGCACGCCCTGGCTGTCGGCGTTGGAGCCGTGGAGCGCAACGGACGACGCGATCGTTCGCCAGGCGTTGC
AGGATGTGGACATGCTGCACCTGCAAAAACGCGCCTGGCACACTTTGTCCGGTGGCGAGCGGCAGCGCGTTCACATCGCC
CGGGCGCTGGCGCAACGGCCGCAGATCCTTCTGCTGGACGAACCGACCAATCATCTGGACATCCAGCATCAACTGACCAT
CCTCGGCCTGGTCAGAGCCTTGCCGGTGACCACCGTGATTGCCCTGCACGACCTGAATCAGGCGCTGGACTGCGACCGTG
TGGCGGTCATGGAAAAGGGTCGGCTGGTCGCGCTGGGTGCGCCGCTCGAGGTGCTGACCCCGGAACGCCTGCTGAGCACC
TTCGGCGTGGTGGCGCACTGGCTGACCGACCCCAGTGACGGGGCGAAGATTCTGCGCCTGCGCTCGCGCTGA

Protein sequence : 
MNALPHSLNAPVLGCAGLGYSVRGAALLRDVDLSIAAGETLAVVGPNGSGKSTLLKLLAGIQKPVSGSVSLDGQALEALS
RRDVARLLAVVEQQAETSDAVTVLDAVELGRTPWLSALEPWSATDDAIVRQALQDVDMLHLQKRAWHTLSGGERQRVHIA
RALAQRPQILLLDEPTNHLDIQHQLTILGLVRALPVTTVIALHDLNQALDCDRVAVMEKGRLVALGAPLEVLTPERLLST
FGVVAHWLTDPSDGAKILRLRSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 2e-37 44
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-33 42
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-27 42
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 5e-27 42
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 5e-27 42
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 6e-27 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psyr_3096 YP_236166.1 ABC transporter BAC0164 Protein 2e-33 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psyr_3096 YP_236166.1 ABC transporter VFG1042 Protein 2e-33 42