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Name : Psyr_2961 (Psyr_2961) Accession : YP_236033.1 Strain : Pseudomonas syringae B728a Genome accession: NC_007005 Putative virulence/resistance : Unknown Product : ABC transporter Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 3549129 - 3550772 bp Length : 1644 bp Strand : + Note : - DNA sequence : ATGAATGACACCGCTCAACTGATCGACATTCGTCATCTGAGTGTCGCCTACCGCTTCGATGGCCAGATCAACCAGGCCGT GCGCAACGTATCCTTCCAGGTCGCCCGAGGTGAAACCGTGGCGATTGTCGGCGAATCCGGGTCCGGCAAGTCGACGATGG CCAACGCCATACTCGGCCTGCTACCGGACAACGCCGCCATCACCGGCGGTGAGCTACACGTCGATGGACACGATCTTGGC CATGCTGGCGAACGCGAGAAACGGCGAATTCGCGGCGGCACCATTGGTCTGGTGCCGCAGGACCCGATGGTCAGCCTCAA CCCGACCCTGCGCATCGGTCGGCAAATCGCCGAAGCACTGCTTCTGGCTCACGGTCGACGTTATCCGGCAGTGGATGCCG ATGTGCTGGAATTGCTGCAGCAGGTCGGTCTGGACAAACCGGTATTGCGCGCTCGTCAGTACCCGCACGAGCTGTCCGGC GGCATGCGCCAGCGCGTGTTGATCGCCATCGCCCTGGCCGGCAATCCTCGCCTGATCATCGCCGACGAACCCACCAGCGC TCTGGACGTGACGGTACAGCGCAGGATCCTCGATCATCTGCAACGTCTGGTGGCCGAGCGTGGTATTTCCCTGCTGATCA TCACCCACGATCTGGGCGTGGCGGCCGACCGGGCCGATCGAGTGCTGGTGATGAACAAGGGCGAGCTGGTCGAACAAGGC CCTCCGCAACAGATACTCATCGCGCCTCGCCATGCCTACACACGTGCGCTGATCGCAGCAGCACCCGCGTTCGGGCAACG CAAGAGCCCGGCAACACCGCGCCCGGTAGCGAGCAGCGCCAGGCCACTGCTGACCTTGAACAACATCGGCAAGACCTATC GCCTGCCCTACGTAAAAGGCGAAGACACAGACTTCCAGGCGCTGCAGGACGTCAACTTCAAGGTGTATGCCGGCCAGACC CTGGCCATCGTCGGCGAGTCCGGCTCGGGTAAAAGTACTGCGCTGCGCATTGCGCTGGGCCTGGAAAAGCCCACTCACGG ACGAGTTTTACTGGACGACCAGGATGTCACCGACCTGGGCTGGCGCGAATTCAGGCCGCTGCGACGGCGTATTCAGCTGG TGCAGCAAAACCCGTTCGCAGCCCTTGACCCACGCTTCACGTTATTCGAAAGCATCGTCGAGCCACTGGTTTCGTTCGGT CTGCTCAAAGGCCGCGAACTGGAGCAGGCGGCACGCCGATTGATAGAGCGAGTGCAGTTGCCCGTGGCCTATCTGGACCG CCTGCCGCGCGAGCTTTCCGGTGGACAGCGTCAGCGGGTTGCCATTGCCAGAGCACTGGCCCTGCAGCCCGATCTGCTGC TGCTCGATGAGCCGGTCTCGGCACTGGACGTGTCAGTGCAGGCGCAGATTCTCGACCTGCTGGTCGAACTGCAAGCCGAA TCGGGCATTGCCTACGTGCTGGTGTCCCACGACCTTGCAGTGGTCGCCAGCGTTGCCCACCAGGTACTGGTGCTCAAGCA TGGCAAGACTGTCGAGCAGGGTCTGGCCGAGGATGTTTTTGCCAGACCTGAAGCGTCCTACACCCAGGAGTTGATTGCCG CGATACCTGGTCGGCGTCTGGAGTTACAAACAGGGACGTACTGA Protein sequence : MNDTAQLIDIRHLSVAYRFDGQINQAVRNVSFQVARGETVAIVGESGSGKSTMANAILGLLPDNAAITGGELHVDGHDLG HAGEREKRRIRGGTIGLVPQDPMVSLNPTLRIGRQIAEALLLAHGRRYPAVDADVLELLQQVGLDKPVLRARQYPHELSG GMRQRVLIAIALAGNPRLIIADEPTSALDVTVQRRILDHLQRLVAERGISLLIITHDLGVAADRADRVLVMNKGELVEQG PPQQILIAPRHAYTRALIAAAPAFGQRKSPATPRPVASSARPLLTLNNIGKTYRLPYVKGEDTDFQALQDVNFKVYAGQT LAIVGESGSGKSTALRIALGLEKPTHGRVLLDDQDVTDLGWREFRPLRRRIQLVQQNPFAALDPRFTLFESIVEPLVSFG LLKGRELEQAARRLIERVQLPVAYLDRLPRELSGGQRQRVAIARALALQPDLLLLDEPVSALDVSVQAQILDLLVELQAE SGIAYVLVSHDLAVVASVAHQVLVLKHGKTVEQGLAEDVFARPEASYTQELIAAIPGRRLELQTGTY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 3e-109 | 46 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-74 | 41 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-74 | 41 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 5e-74 | 41 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-74 | 41 |
