Gene Information

Name : Psyr_2897 (Psyr_2897)
Accession : YP_235969.1
Strain : Pseudomonas syringae B728a
Genome accession: NC_007005
Putative virulence/resistance : Virulence
Product : LuxR response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2197
EC number : -
Position : 3476311 - 3476979 bp
Length : 669 bp
Strand : -
Note : -

DNA sequence :
ATGACCGTTGCGCGAGGTGTCTGCTTGATTAAGGTGCTAGTTGTCGATGACCATGATCTTGTCCGGACAGGCATCACACG
CATGCTGGCCGACATTGATGGTCTGCAGGTTGTCGGACAGGCCGATTCCGGCGAGGAATCCCTGAAAAAAGCGCGCGAGC
TCAAGCCCGACGTCGTGCTGATGGACGTCAAGATGCCGGGTATCGGAGGTCTGGAAGCGACGCGCAAGATGCTGCGCAGC
CACCCGGATATCAAGGTCGTCGCTGTCACCGTCTGTGAAGAAGATCCTTTCCCGACCCGTTTGCTGCAGGCCGGCGCTGC
CGGTTACATGACCAAGGGCGCCGGGCTCGCTGAAATGGTCCAGGCCATTCGCCTGGTGTTTGCCGGTCAGCGTTACATCA
GCCCGCAGATTGCCCAGCAACTGGCATTGAAGTCATTTCAGCCGCAGGTCAACAATTCGCCGTTCGATCTGCTGTCCGAG
CGCGAGATCCAGATTGCCCTGATGATTGTTGGCTGTCAGAAAGTCCAGACCATCTCGGACAAGCTGTGCCTGTCACCGAA
AACCGTTAATACCTACCGATACCGTATCTTTGAAAAGCTCTCGATCAGCAGTGATGTTGAACTGGCTTTGCTCGCTGTAC
GTCACGGCATGGTTGATGCCAGCGCCTGA

Protein sequence :
MTVARGVCLIKVLVVDDHDLVRTGITRMLADIDGLQVVGQADSGEESLKKARELKPDVVLMDVKMPGIGGLEATRKMLRS
HPDIKVVAVTVCEEDPFPTRLLQAGAAGYMTKGAGLAEMVQAIRLVFAGQRYISPQIAQQLALKSFQPQVNNSPFDLLSE
REIQIALMIVGCQKVQTISDKLCLSPKTVNTYRYRIFEKLSISSDVELALLAVRHGMVDASA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00302 YP_008207767.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR25 Protein 1e-57 58
BJAB0868_00306 YP_008211632.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain Not tested AbaR26 Protein 1e-57 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psyr_2897 YP_235969.1 LuxR response regulator receiver VFG1889 Protein 3e-56 53