Gene Information

Name : Psyr_0273 (Psyr_0273)
Accession : YP_233384.1
Strain : Pseudomonas syringae B728a
Genome accession: NC_007005
Putative virulence/resistance : Unknown
Product : integrase catalytic subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 291899 - 292735 bp
Length : 837 bp
Strand : -
Note : -

DNA sequence :
ATGGAACTGAGGCCTTTACATCCTCTGGACGGCCTGCTGAAGTTTGCCGGTCTGGCACGCAGCACTTTTTACTATCAACA
AAAGGTACTGCTGGTAGATGACAAATACGCCGGGCTGAAAGACCTGATTCAGGCAACTTTCTACGAGCACAAGGGCCGGT
ATGGCTATCGTCGCATCACGGCAGCTTTGCGCAGGGCGGGCCATCTTGTGAACCACAAGACGGTGCAGAAACTAATGGGG
CAGCTAGGCCTGAAGAGCCTGATACGCGTGAAGAAATACCGTTCCTACAAAGGCGAAACAGGCAAGGCCGCGCCTAACCT
GCTAAAGCGTGATTTCAAAGCGCAATACCTTAACCAGAAATGGGCCACCGACGTGACCGAATTCAAAGTAGGAGGCCAGA
AACTTTATCTGTCGCCGATCATGGATCTGTACAGCGGCGAAATCATTTCCTATGCGATTGCCAGGCGCCCGCTGTACTCC
ATGGTCGACGAAATGCTTGAAGGAGCATTTAAGCGGCTTGGACCGCATGAAAAGCCGATTTTGCATTCCGACCAGGGCTG
GCAATATCGGATGCCTATTTACCAGCGACTGCTCAATGAGAATTCGATCGCAGCCAGCATGTCGCGCAAGGGTAACTGCT
ACGACAACGCGGCTATTGAGAGCTTTTTTAGCACGCTGAAATCCGAATTTTTCTACCTGAACAAATTTAACGATCTGGAT
GAGCTTCAAGCGGGTATCGAAGAGTACATTGAGTATTACAATCACTCACGCATAAAACTGAAGCTTAACGGCCTGAGTCC
TGTGGAATACAGAATGCAGGCCGCCAAGGCAGCGTAG

Protein sequence :
MELRPLHPLDGLLKFAGLARSTFYYQQKVLLVDDKYAGLKDLIQATFYEHKGRYGYRRITAALRRAGHLVNHKTVQKLMG
QLGLKSLIRVKKYRSYKGETGKAAPNLLKRDFKAQYLNQKWATDVTEFKVGGQKLYLSPIMDLYSGEIISYAIARRPLYS
MVDEMLEGAFKRLGPHEKPILHSDQGWQYRMPIYQRLLNENSIAASMSRKGNCYDNAAIESFFSTLKSEFFYLNKFNDLD
ELQAGIEEYIEYYNHSRIKLKLNGLSPVEYRMQAAKAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1088 YP_853108.1 transposase subunit Not tested PAI IV APEC-O1 Protein 2e-85 59
EFAU085_00737 YP_008394261.1 ISEnfa3, transposase Not tested Not named Protein 6e-74 57
SEQ_0791 YP_002746129.1 transposase Not tested ¥ÕSeq2 Protein 7e-58 52
SEQ_1760 YP_002746996.1 transposase Not tested ¥ÕSeq3 Protein 7e-58 52
CDCE8392_1982 YP_005134513.1 transposase-like protein Not tested Not named Protein 6e-52 44
CDBH8_0905 YP_005159997.1 transposase-like protein Not tested Not named Protein 1e-52 44
SE0101 NP_763656.1 transposase Not tested SCCpbp4 Protein 2e-22 43