Gene Information

Name : Psyr_2481 (Psyr_2481)
Accession : YP_235558.1
Strain : Pseudomonas syringae B728a
Genome accession: NC_007005
Putative virulence/resistance : Virulence
Product : Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 2878821 - 2879321 bp
Length : 501 bp
Strand : +
Note : -

DNA sequence : 
ATGGCTCAAGTGACCCTCAAAGGCAGCCCCGTTCAGGTCAGTGGCAACCTGCCTGAAGTCGGTAGCAAGGCACACGATTT
CACGCTGGTGGGCGCAGGTCTTGCCGATAAGACTCTGGCTTCCTTCGCCGGCAAGCGCAAGGTATTGAACATCTTCCCGA
GCGTCGATACGCCGACCTGTGCCACTTCGGTACGTAAATTCAACACTCAGGCCAATGACCTGAGCAACGCCGTGGTTCTG
TGCATCTCGGCCGACCTGCCGTTTGCCCAGGCGCGTTTCTGCGGCTCCGAAGGCCTGGAGAATGTCCAGAACCTGTCCTC
GTTCCGCAGTGCCGATTTTGCCCGCAATTATGGTGTTGCCGTTGCCGACGGCCCGCTCGCGGGTCTGACTGCGCGCGCCG
TGGTTGTTCTGGACGAGAACGACAAGGTGCTGCACAGCGAACTGGTCGCCGAGATCGGTAGTGAGCCCAACTACGACGCT
GCATTGGCTGTGCTGAAGTAA

Protein sequence : 
MAQVTLKGSPVQVSGNLPEVGSKAHDFTLVGAGLADKTLASFAGKRKVLNIFPSVDTPTCATSVRKFNTQANDLSNAVVL
CISADLPFAQARFCGSEGLENVQNLSSFRSADFARNYGVAVADGPLAGLTARAVVVLDENDKVLHSELVAEIGSEPNYDA
ALAVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 6e-35 48
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 8e-35 48
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 6e-35 47
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 8e-35 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psyr_2481 YP_235558.1 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen VFG0087 Protein 2e-35 47