Gene Information

Name : Psyr_2244 (Psyr_2244)
Accession : YP_235325.1
Strain : Pseudomonas syringae B728a
Genome accession: NC_007005
Putative virulence/resistance : Unknown
Product : DNA topoisomerase III
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0550
EC number : 5.99.1.2
Position : 2608140 - 2610110 bp
Length : 1971 bp
Strand : -
Note : decatenates replicating daughter chromosomes

DNA sequence :
ATGCGGCTGTTTCTCTGCGAAAAACCCTCCCAGGCCAAAGATATTGCGGCTGCGCTCGGCGCAACCCGGCGTGGCGACGG
CTGCTGGGTGGGTGCCAATGCGACGGTAACCTGGTGCATCGGCCACCTGCTGGAAACCGCCCCGCCCGATGCCTACGATG
CACGTTACAAACGCTGGGTACTGGAAGACCTGCCCATCGTGCCGGAAAAATGGAAGATGCTGGTCAAGCCCAGAACCGCC
AGCCAGTTCAAGGCAGTCAAGCGGCTGCTGGGTGAAGCGACGGAGCTGGTGATTGCCACCGACGCCGACCGTGAGGGTGA
AATGATCGCCCGCGAACTGATCGAGCACTGTCGCTATCGCGGGCCGATTCAGCGTTTGTGGCTGTCGGCACTGGATGACG
CCTCGATCCGCAAGGCACTGGCGGCGCTCAAGCCCGGTGCCGATACGTTCAGCCTGTATCACTCGGCACTGGGCCGATCA
CGTGCCGACTGGCTGATCGGCATGAACATGAGCCGCCTGTTCACCCTGCTGGGTCGGCAATCCGGTTATCAGGGCGTCCT
TCCGGTCGGCCGGGTACAAACCCCGACCCTGCGACTGGTGGTGGACCGTGATCGCAGTATCGCCAACTTTGTCCCGGCGC
CCTATTGGGCTATCGACGTCAGGCTGCTGCATGACAATCAGGCGTTCATTGCCCAGTGGCGCGCACCCTCGGATGCCTGC
GACGATCAGGACCGCTGCCTGAATCAGGCGCTGGCGCAACAGGCTGCGCAAGCGATGCGCGCCGCAGCCAGCGCACGGCT
GGTCAAGCTGCGCACCGAGCGCATTCGCGAAGCGGCGCCCTTGCCGTTCGACCTGGGCACCCTGCAGGAAATCTGCTCGA
AAAAGCTCGGGCTCGGCGCGCAGGAAACCCTGGACATCGCCCAGTCCCTGTATGAAACCCACAAGGTCATCACCTACCCG
CGCAGCGATTGCGGATACCTGCCGAACAGTCAGCACGGTGAAGCCGCAGGCATCATCGCGGCGCTGTGCAAGGCCGACCC
TGCGCTGGCAAACCTGTCGCCGCACCTCGACCCACAACGTCGGTCACGGGCCTGGAATGACAGCAAAGTGACGGCCCACC
ACGGCATCATTCCCACCGCAGCTGTACGCGGCGTAGAACGTCTGAGCGGTAAACCGCGAGCGGTGTACACCCTGATCAGG
GCGCGTTATCTGGCTCAGTTTCTGCCCAACCATGAATACGACCGCACCCAGGCCGATTTCGACTGTGCAGGCCACGCGCT
GCGTGCGGTGGGCAAGCAGATTGTCGAGCCGGGCTGGAAGCGTGCAATGCCCGAAGCGCTGGCCCCGGCCAAGGGTCGCG
AAGCGCCTGCCCCGCAGCCGTTGCCGGCATTGTTTCAGGGCTGCGAGTGTGCAGTCGCCGAGGTCATCCTCAAGGACCTC
TGGACCCAGCCGCCCAAGCCGTTCACCGAGGGAGACCTGATCAAGGCGATGAAGAACGTCGCCAAACTGGTGGAAGACCC
GCTGCTCAAACAGAAGCTCAAGGACACCACCGGCATCGGCACCGAAGCCACCCGCGCCGGGATCATTCAAGGCCTGCTGG
ACCGTGGCTACCTGACCAAGCAGGGCAAGTCGCTGTGCGCAGCTCCGGCAGCCTTCAGCCTGATCGACGCCGTGCCCCGT
GCCATCGCCGATCCGGGCACCACCGCCATCTGGGAACAGGCGCTGGACATGGTCCAGAGCGGCGAAATGAGCCTTGAAGA
GTTCGTCGCCAAACAGGCGGCGTGGATGAGCAAACAGGTGAGCCGTTGCGTCGGCATGCGTATGAGCATCAGCGGACCGG
CCAGCCCGGCAGGCGTTAAACCGCCCTGGAAGAAAAAACGCAAGACCACAACGCGCGTCGCCAAGACCGCCACAACGGAC
ACTGCGGCGAAAAAGCCGCGGCGTGCTGTCAGACCGGCCGCCAAGGCGTAG

Protein sequence :
MRLFLCEKPSQAKDIAAALGATRRGDGCWVGANATVTWCIGHLLETAPPDAYDARYKRWVLEDLPIVPEKWKMLVKPRTA
SQFKAVKRLLGEATELVIATDADREGEMIARELIEHCRYRGPIQRLWLSALDDASIRKALAALKPGADTFSLYHSALGRS
RADWLIGMNMSRLFTLLGRQSGYQGVLPVGRVQTPTLRLVVDRDRSIANFVPAPYWAIDVRLLHDNQAFIAQWRAPSDAC
DDQDRCLNQALAQQAAQAMRAAASARLVKLRTERIREAAPLPFDLGTLQEICSKKLGLGAQETLDIAQSLYETHKVITYP
RSDCGYLPNSQHGEAAGIIAALCKADPALANLSPHLDPQRRSRAWNDSKVTAHHGIIPTAAVRGVERLSGKPRAVYTLIR
ARYLAQFLPNHEYDRTQADFDCAGHALRAVGKQIVEPGWKRAMPEALAPAKGREAPAPQPLPALFQGCECAVAEVILKDL
WTQPPKPFTEGDLIKAMKNVAKLVEDPLLKQKLKDTTGIGTEATRAGIIQGLLDRGYLTKQGKSLCAAPAAFSLIDAVPR
AIADPGTTAIWEQALDMVQSGEMSLEEFVAKQAAWMSKQVSRCVGMRMSISGPASPAGVKPPWKKKRKTTTRVAKTATTD
TAAKKPRRAVRPAAKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
topB AAN62194.1 putative DNA topoisomerase III Not tested PAGI-2(C) Protein 0.0 62
topB AAN62317.1 putative DNA topoisomerase III Not tested PAGI-3(SG) Protein 0.0 62
pph56 CAI36097.1 Topoisomerase IA Not tested PPHGI-1 Protein 0.0 62
topB NP_458624.1 topoisomerase B Not tested SPI-7 Protein 1e-142 49
topB NP_807836.1 DNA topoisomerase III Not tested SPI-7 Protein 1e-142 49
topB AAF14809.1 topoisomerase B Not tested SPI-7 Protein 8e-143 49
PMI2630 YP_002152332.1 DNA topoisomerase III Not tested Not named Protein 7e-142 49
topB1 YP_005176228.1 DNA topoisomerase III Not tested ICEPmu1 Protein 5e-142 49
topB AAW83109.1 TopB Not tested GGI Protein 8e-109 42