Gene Information

Name : Psyr_2067 (Psyr_2067)
Accession : YP_235148.1
Strain : Pseudomonas syringae B728a
Genome accession: NC_007005
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4181
EC number : -
Position : 2413907 - 2414590 bp
Length : 684 bp
Strand : -
Note : -

DNA sequence : 
ATGAGTGAAAGTATTCTCAGTGCCCAAAGCCTCAGCAAAGTAGTCCCCAGCACCGAAGGTGACCTGACCATCCTGCACGA
ACTCTCCCTGGAACTAAACAAGGGCGACACGCTGGCCATCGTCGGCGCCTCCGGTTCGGGCAAATCCACCCTGCTCGGCT
TGCTGGCCGGGCTGGACCTGCCCAGTGCCGGTTCAGTCATCCTTTCGGGGCGCAACCTCAGCGAACTGGATGAAGACCAG
CGCGCCAGAGTGCGTGCCGAGCACGTCGGGTTCGTGTTTCAGTCGTTCCAGTTACTCGACAGCCTCAACGCGCTGGAAAA
CGTCATGCTGCCGATGGAGCTCGAAGGCCGCAAGGACGCCCGCGAAAAAGCCCGTGACCTGCTGGAACGGGTGGGCCTTG
GCCAGCGCCTGACCCATACGCCGCGTCAGCTGTCCGGTGGCGAACAGCAACGGGTCGCCATTGCCCGCGCCTTCGCTGCC
GACCCCGACGTGCTGTTTGCCGACGAACCCACCGGCAACCTTGACAGCCACACCGGCGAACGCATCAGCGACCTGCTCTT
CGAACTGAACAAGGAGCGCAACACCACGCTGGTGCTGGTCACTCACGATGAGCGTCTGGCGCATCGCTGCCGTCGCCTGA
TCCGCCTTGAAGGGGGCCGACTGGTCGCCCCGCTGGAGCCTTGA

Protein sequence : 
MSESILSAQSLSKVVPSTEGDLTILHELSLELNKGDTLAIVGASGSGKSTLLGLLAGLDLPSAGSVILSGRNLSELDEDQ
RARVRAEHVGFVFQSFQLLDSLNALENVMLPMELEGRKDAREKARDLLERVGLGQRLTHTPRQLSGGEQQRVAIARAFAA
DPDVLFADEPTGNLDSHTGERISDLLFELNKERNTTLVLVTHDERLAHRCRRLIRLEGGRLVAPLEP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-22 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-22 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-22 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-22 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psyr_2067 YP_235148.1 ABC transporter NC_008702.1.4606598. Protein 2e-28 46
Psyr_2067 YP_235148.1 ABC transporter NC_012469.1.7686878. Protein 5e-30 45