|
Name : Psyr_2047 (Psyr_2047) Accession : YP_235128.1 Strain : Pseudomonas syringae B728a Genome accession: NC_007005 Putative virulence/resistance : Unknown Product : potassium-transporting ATPase subunit A Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2060 EC number : 3.6.3.12 Position : 2390109 - 2391803 bp Length : 1695 bp Strand : + Note : catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions DNA sequence : ATGCACAGTTACGATTATCTGTTGATCCTGGCCTTTCTGGTCCTGCTGCTGGCCCCCGCGCCGTGGCTGGGGCGTTTCTA TTACCGGGTCATGGAAGGCGAGCGCACCTGGCTGAGCCCGTTGCTGGGGCCGGTCGAGCGCGCCTGCTACCGGATCTCCG GCGTCGACCCGAAAACCGAGCAGTCCTGGCAGCAATACGCCTGGGCCTTGCTGGCGTTCAACCTGGCGGGCTTTGTCGTG CTGTTCGCCATCCTCATGCTGCAAGGCGTGCTGCCGCTCAACCCGCAGCAACTGCCGGGCATGGAATGGTCGCTGGCCTT CAACACCACCATGAGCTTTGTCGCCAACACCAACTGGCAGGCCTTCAGCGGCGAAGCGTCGCTCAGCTACCTGAGCCAGA TGGTCGGCCTGACCGTGCAGAACTTCGTCAGCGCCGCGACCGGCCTGGCAGTACTGGTGGCACTGTGTCGCGGCATCAGT CGTCGCTCATCGCAGAGCCTGGGTAACTTCTGGGCCGACATGACCCGCGCCACGCTCTACGGCCTGTTGCCGATCAGTAT CGTGCTGGCGGTGTTTCTGGTCTGGCAGGGCGTGCCACAGAACTTCGGCCACTACATCGACGCGCTGACCCTGCAGGGTG CTGATCAGAGCCTGCCGATGGGCCCTGCGGCCAGTCAGATCTCCATCAAGCAACTGGGCACCAATGGTGGCGGCTTCTTC GGCGTCAACTCGGCGCATCCGTTCGAGAACCCCACGGCCTGGAGCAACCTGTTCGAACTGGTGTCGATCCTGCTGATCCC GGCTGCACTGGTGTTCACCTTCGGCCATTACGTCAAGGACATGCGCCAGAGCCGCGCGATCCTGGGCTGCATGCTGGCAT TGCTGCTGATCGGCGGTGCGGTCTCGCTGTGGGCCGAGTACCAGCCTAACCCGGCGCTGAACATCGCCGGTGTCGAGCAG ACCGCACCGCTGGAAGGCAAGGAAACCCGCTTTGGCACCACCGGCACGGTGCTCTGGTCAGTCGCTACCACTGCGGCGTC CAACGGCTCGGTCAACGGCATGCATGACAGCCTCAACCCGCTGACCGGCATGGTCGCGCTGGTCAACATGATGGTCGGCG AAGTGATCTTCGGCGGCGTCGGTGTCGGCCTCAACGGCATGCTGCTCAACGTGCTTATCGCTGTGTTCCTCGCGGGTCTG ATGATTGGCCGCACCCCGGAATACCTGGGCAAGAAGCTGCAGGCGCAGGAAGTCCGGCTGCTGGTCGCGACCTTGCTGGT GATGCCGGTCGGCGTGCTGGTGCTGGGCGCGATTGCCGCGAGCCTGCCCGGCCCGGCCGGTGCCGTCAGCAACCCCGGCC CGCATGGCTTCAGTCAGTTGCTGTACGCCTACACCTCGGCCACGGCCAACAACGGTTCGGCGTTCGGCGGTTTCAGTGCC AACACCGTGTTCCACAACCTGATGCTCAGCCTGGCGATTTTCATCGGCCGCTTCGGCTACATCCTGCCGGTGCTGGCCCT GGCCGGTAGCCTGGCCATGAAGAAGGCCGCGCCGCAGGGCCAGAACAGCTTCCCGACCCATGGCCTGCTGTTCGTCACCC TGTTGACCGTCACGATTCTGCTGGTGGGTGGCTTGACCTTCCTGCCGACCCTGGCACTGGGGCCGATTGCCGAACACCTG AGCCTGGGTTTCTGA Protein sequence : MHSYDYLLILAFLVLLLAPAPWLGRFYYRVMEGERTWLSPLLGPVERACYRISGVDPKTEQSWQQYAWALLAFNLAGFVV LFAILMLQGVLPLNPQQLPGMEWSLAFNTTMSFVANTNWQAFSGEASLSYLSQMVGLTVQNFVSAATGLAVLVALCRGIS RRSSQSLGNFWADMTRATLYGLLPISIVLAVFLVWQGVPQNFGHYIDALTLQGADQSLPMGPAASQISIKQLGTNGGGFF GVNSAHPFENPTAWSNLFELVSILLIPAALVFTFGHYVKDMRQSRAILGCMLALLLIGGAVSLWAEYQPNPALNIAGVEQ TAPLEGKETRFGTTGTVLWSVATTAASNGSVNGMHDSLNPLTGMVALVNMMVGEVIFGGVGVGLNGMLLNVLIAVFLAGL MIGRTPEYLGKKLQAQEVRLLVATLLVMPVGVLVLGAIAASLPGPAGAVSNPGPHGFSQLLYAYTSATANNGSAFGGFSA NTVFHNLMLSLAIFIGRFGYILPVLALAGSLAMKKAAPQGQNSFPTHGLLFVTLLTVTILLVGGLTFLPTLALGPIAEHL SLGF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kdpA | NP_814333.1 | potassium-transporting ATPase subunit A | Not tested | Not named | Protein | 4e-80 | 49 |
| ef0087 | AAM75290.1 | EF0087 | Not tested | Not named | Protein | 3e-80 | 49 |
| kdpA | YP_190030.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 2e-62 | 42 |
| unnamed | BAB43902.1 | potassium-transporting ATPase(A chain) | Not tested | Type-II SCCmec | Protein | 1e-62 | 42 |
| SAR0070 | YP_039538.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 2e-62 | 42 |
| truncated-kdpA | NP_370596.1 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 2e-62 | 42 |
| kdpA | NP_373308.2 | potassium-transporting ATPase subunit A | Not tested | Type-II SCCmec | Protein | 2e-62 | 42 |
| kdpA | YP_251948.1 | potassium-transporting ATPase subunit A | Not tested | SCCmec | Protein | 2e-63 | 42 |
