|
Name : Psyr_1682 (Psyr_1682) Accession : YP_234768.1 Strain : Pseudomonas syringae B728a Genome accession: NC_007005 Putative virulence/resistance : Resistance Product : arsenical pump membrane protein Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1055 EC number : - Position : 1890072 - 1891352 bp Length : 1281 bp Strand : + Note : - DNA sequence : ATGCTGATAGCAACGCTGATTTTCCTGTTCACCATCACGCTGGTCATCTGGCAACCCAAGGGCCTGGGCGTAGGCTGGAG TGCCGTATTGGGGGCAATTCTGGCGTTGCTGACAGGCGTCGTGCACGTCAGTGACATCGCTGTGGTGTGGGGCATCATCT GGAATGCCACGGCGACGTTCATTTCGCTGATCATCATCACGCTGCTGCTCGATGAGGCCGGTTTCTTCGCCTGGGCAGCG CTGCATGTGGCGCGCTGGGGCAAGGGCAACGGGCGCCGTTTGTTTGCCCTGTTCGTGCTATTCGGTGCGCTGGTGTCCGC CTTGTTCGCCAACGATGGCGCGGTGCTGATCCTCACCCCGATCGTCATTGCCATGATGCTGGCGTTGCGTTTCTCGCCTG CGTCGACGCTGGCGTTCGTCATGGCGGCCGGTTTCATCGCCGATACGGCCAGCCTGCCGCTGGTGGTCTCGAACCTGGTG AACATCGTGTCGGCGGATTACTTCAAGATCGGTTTCAACCGTTACGCAGCCGTCATGGTGCCGGTGAATCTGGCCAGTGT CGCCGCCACCCTGGCCGTGCTGATGTGGTATTTCCGTCGGGATATTCCCGCCGAGTTCGAGCCCGAACAGCTGGACAAGC CGGAAACGGTCATCCATGACCGCGCCACGTTTCTGGCCGGTTGGGCGGTGCTGGTGATTCTGCTGGTGGGCTGTTTCGCC CTTGAACCGCTGGGCATCCCGATCAGCGCGATCTCGTCGGTGTGTGCAGTGTTGCTGCTGGCCATCGCCGCCAAAGGGCA TACGATCAAGACCCGCAAGGTGATGAAAGAAGCACCGTGGCACATCGTGGTCTTTTCGCTGGGCATGTACCTGGTGGTCT ATGGCCTGCGTAACGCCGGGCTGACCGATTACCTGGCCAATCTGCTGGACTGGTTCGCGGGCTATGGCATCTGGGGCGCG GCGATGGGCACCGGCGTGATGACTGCGTTCCTGTCTTCGATCATGAACAACATGCCCACGGTACTCATCGGGCTGCTGTC CATCGACGCAAGTCATGCCAGCGGTGCGATCCAGGAAGCCATGATCTACGCCAACGTGATCGGTAGCGACCTCGGCCCGA AAATCACCCCCATCGGCAGCCTGGCCACGCTGCTCTGGCTGCATGTGCTGCAGCGCAAGGGCATCACTATCAGCTGGGGC TACTACTTCAAGGTCGGTATCGTGCTGACCGTGCCTGTGCTGCTGGTCACACTGGCTGCGCTGGCATTGCGGTTGAGTTG A Protein sequence : MLIATLIFLFTITLVIWQPKGLGVGWSAVLGAILALLTGVVHVSDIAVVWGIIWNATATFISLIIITLLLDEAGFFAWAA LHVARWGKGNGRRLFALFVLFGALVSALFANDGAVLILTPIVIAMMLALRFSPASTLAFVMAAGFIADTASLPLVVSNLV NIVSADYFKIGFNRYAAVMVPVNLASVAATLAVLMWYFRRDIPAEFEPEQLDKPETVIHDRATFLAGWAVLVILLVGCFA LEPLGIPISAISSVCAVLLLAIAAKGHTIKTRKVMKEAPWHIVVFSLGMYLVVYGLRNAGLTDYLANLLDWFAGYGIWGA AMGTGVMTAFLSSIMNNMPTVLIGLLSIDASHASGAIQEAMIYANVIGSDLGPKITPIGSLATLLWLHVLQRKGITISWG YYFKVGIVLTVPVLLVTLAALALRLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| arsB2 | YP_001007633.1 | arsenical pump membrane protein | Not tested | YAPI | Protein | 5e-124 | 71 |
| arsB | YP_252017.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 2e-92 | 56 |
| arsB | YP_005754065.1 | arsenical pump membrane protein | Not tested | Type-XI SCCmec | Protein | 3e-92 | 55 |
| SH0109 | YP_252024.1 | arsenical pump membrane protein | Not tested | SCCmec | Protein | 9e-94 | 55 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Psyr_1682 | YP_234768.1 | arsenical pump membrane protein | BAC0578 | Protein | 4e-124 | 71 |
| Psyr_1682 | YP_234768.1 | arsenical pump membrane protein | BAC0577 | Protein | 2e-120 | 70 |
| Psyr_1682 | YP_234768.1 | arsenical pump membrane protein | BAC0031 | Protein | 5e-119 | 70 |
| Psyr_1682 | YP_234768.1 | arsenical pump membrane protein | BAC0576 | Protein | 2e-123 | 70 |
| Psyr_1682 | YP_234768.1 | arsenical pump membrane protein | BAC0575 | Protein | 5e-95 | 56 |
| Psyr_1682 | YP_234768.1 | arsenical pump membrane protein | BAC0574 | Protein | 3e-93 | 56 |
