Gene Information

Name : Psyr_1522 (Psyr_1522)
Accession : YP_234610.1
Strain : Pseudomonas syringae B728a
Genome accession: NC_007005
Putative virulence/resistance : Unknown
Product : single-stranded DNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 1712925 - 1713389 bp
Length : 465 bp
Strand : -
Note : binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA

DNA sequence :
ATGGGCACATCAGTAGACTGGGAAGGTAACCTTGGCTCTGCTCCAGAATTTAAGGAGTTCGCCAACGGCAACAAAGATCC
GCGCCGCTTGCTACGGCTGAACGTTTACTTTGACAATTCAATTCCGAAAGCCGATGGATCAGGCTTTGAGGACAGAGGCG
GTTTCTGGGCCAACGTAGAATATTGGCACCGCGATGCGGAACACTATGCCAACCTGTTCCAAAAGGGCATGCGGGTCATG
ATCCAAGGGCGAGCGATCATTGATAACTGGACCAAGGACGGTAAGGAGTTTTCTGCGTTGAAAGTGCAGGCATCGCGGGT
CGCAATCCTTCCCCACCGGGTTGAAGCGGTGCAATTGGCCCCTTCCCAGTCATACAACCAGCCGCAAAGCGAGCAACAGC
ATACCGACCGGAATTCAACTCAAAATGATGCAGCTCCGCATTTCGACGACGATATTCCTGTGTAG

Protein sequence :
MGTSVDWEGNLGSAPEFKEFANGNKDPRRLLRLNVYFDNSIPKADGSGFEDRGGFWANVEYWHRDAEHYANLFQKGMRVM
IQGRAIIDNWTKDGKEFSALKVQASRVAILPHRVEAVQLAPSQSYNQPQSEQQHTDRNSTQNDAAPHFDDDIPV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb CAI36053.1 single-stranded DNA-binding protein Not tested PPHGI-1 Protein 4e-68 99
ssb AAP84220.1 single strand DNA binding protein Not tested PAPI-1 Protein 3e-33 60
unnamed ABR13438.1 single-stranded DNA-binding protein 2 Not tested PAGI-5 Protein 6e-34 58
ssb AAN62318.1 putative single-stranded DNA binding protein Not tested PAGI-3(SG) Protein 2e-33 56
ssb AAN62195.1 putative single-stranded DNA binding protein Not tested PAGI-2(C) Protein 5e-30 50