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Name : Psyr_1517 (Psyr_1517) Accession : YP_234605.1 Strain : Pseudomonas syringae B728a Genome accession: NC_007005 Putative virulence/resistance : Virulence Product : type II and III secretion system protein Function : - COG functional category : N : Cell motility COG ID : COG1450 EC number : - Position : 1703673 - 1705409 bp Length : 1737 bp Strand : - Note : - DNA sequence : ATGAGCATGCCCTTCATGCGTCAGACCGCTCTGAGTCTCGCTGTTCTAACGGCATCAGCATGCTCAGTGCAACGGGTGGA TGAAGCCGCTGCACGGGCAGAGGCTACCGCCGATTCTGCCGGCCGTTACGCGGCTATCCAGCGTAACAAGCAGCAACAGG AACGTCGGGACACAGTGATATTCAGCGACAAACCCTGGGTTTCAACGCAGCCAGTTGTTGCGAGACGAGGCATCCCCACC AAGTATGACTGTGAGGTCGCATATAGGCCTGCTGGCAGTGTCGGAATTGCTGAAATTGCCCAGTACATTTCCAGACAGTG CGGGATCCCTGTCCTGGTCTCGCCGGATGCGCTCAATCCTGGCCTGCTGAACGCTAATGCACCTGCACAGGGCAACAATG CGCCTCCAATCAGCACGGCCCCCAACCCTGATAGCCTGGCCGGGTTGCTGCCTGCAGGTATCACGGGCGGCTCCAACCTG GCGCAGGCCTCTCAGGGGAGAAGTTCTGACTTCGCATCCATGCTGACACCGAACCTCGTCAGTGGGTTGCGCTTCACAGG GAAAGCCTCGGGTCTGCTGGATGAGGTCACCGCGCGGCTGGGACTCACCTATCGATTCAATCCCACCTCACGGTCAGTGC AGGTCAGCTATTTCGACACCAAGGTGTTTGACGTCTACGCATTTGGAGACGTGCAGGAAATCAAAAGCACCGTCAGATCC GGTATGACCACCTCCTCAGGTTCGGGAAGTGGTTCGTCGAGCGGATCATCGTCAGGTAGCAGTTCCTCAGGCGTTTCGGG TGACTCGGGCAGCAACCAGAGCACTACAGTCACTCTCAACACATCGATCCTGACTGACATCCAGAGCAACGTGAGGGCAA TGCTGAGTACCTCGCCGCCTGGTCGCATGTATCTGTCACCGTCGACCGGGACGTTGACCGTGACTGACCGGCCCGACGTG CTTTCGAACGTTGAGACCTATCTGGCCAAGACCAACCACGCGATCACCCAACAAGTGCTGTTCAATGTGAAGGTGTTTGA GGCGACGCTGACCGACACCGATCAGCTGGCTTTGAACTGGGCGGCCGTCTACAACTCGCTGAGCACAAAGTGGGGCCTGT CTCTCTCGAATACTGTGCCAGGCATCAGCTCCAGCGCAATCTCGGGCTCTGTTGGCATTGTCGATACGGCCAACTCTGCC TGGGCAGGTTCGAACGCGATCATCCAGGCAATCGCAGAGCAGGCCCGGATCTCGAATGTTCGATCGCCGTCTGTGACCAC ATTGAATCTGCAGCCTGCTCCGCTGCAGATCGGCAACGTCCAAGGCTACATCCCATCGGTTCAGACCAACACCACGGCGT CAGTGGGCTCCAGCACGGCAATTACTCCGGGCACTATCACCTCCGGCTTCAACATGACACTGCAGCCTCGCTTGATGGAC GATGACGAGATGTTGCTCATGGTATCGATCAATATGAGCTCCAAACCTACCTTCGAGCCATTCACGAGCAACGGCTCCAG CGTCCAGATCCCCAACTACGATGCGAAAAGTTTGTCACCGAAGGTGAAGCTGCGCAGCGGTCAGACATTGATCCTGTCGG GCTTTGAGGAGCTCAGCGACAACACGGACAAGATCGGCACAGGTTCCCCCGGATTCTTCGGGCTTGGAGGTGGGCGTAAG CGCACCTCGTCAAAAAGCGTTCTGGTAGTGCTGATCACCCCGATTGTGACCAACTGA Protein sequence : MSMPFMRQTALSLAVLTASACSVQRVDEAAARAEATADSAGRYAAIQRNKQQQERRDTVIFSDKPWVSTQPVVARRGIPT KYDCEVAYRPAGSVGIAEIAQYISRQCGIPVLVSPDALNPGLLNANAPAQGNNAPPISTAPNPDSLAGLLPAGITGGSNL AQASQGRSSDFASMLTPNLVSGLRFTGKASGLLDEVTARLGLTYRFNPTSRSVQVSYFDTKVFDVYAFGDVQEIKSTVRS GMTTSSGSGSGSSSGSSSGSSSSGVSGDSGSNQSTTVTLNTSILTDIQSNVRAMLSTSPPGRMYLSPSTGTLTVTDRPDV LSNVETYLAKTNHAITQQVLFNVKVFEATLTDTDQLALNWAAVYNSLSTKWGLSLSNTVPGISSSAISGSVGIVDTANSA WAGSNAIIQAIAEQARISNVRSPSVTTLNLQPAPLQIGNVQGYIPSVQTNTTASVGSSTAITPGTITSGFNMTLQPRLMD DDEMLLMVSINMSSKPTFEPFTSNGSSVQIPNYDAKSLSPKVKLRSGQTLILSGFEELSDNTDKIGTGSPGFFGLGGGRK RTSSKSVLVVLITPIVTN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pilN | CAI36059.1 | type IV pilus protein | Not tested | PPHGI-1 | Protein | 0.0 | 99 |
| pilN2 | AAP84210.1 | PilN2 | Virulence | PAPI-1 | Protein | 2e-94 | 48 |
| unnamed | ABR13431.1 | putative PilN | Not tested | PAGI-5 | Protein | 1e-94 | 48 |
