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Name : Psyr_1514 (Psyr_1514) Accession : YP_234602.1 Strain : Pseudomonas syringae B728a Genome accession: NC_007005 Putative virulence/resistance : Virulence Product : type II secretion system protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1700093 - 1701724 bp Length : 1632 bp Strand : - Note : - DNA sequence : ATGAGCGGCGCGGTACGAATTGAGCCAGACATTGAGGCTGATCCGTTGGCACGCCAGGTCGCCCGGCCGACCGCAGTCGT GCAACCGATCACCATTGCCATGCAATCTGACGTGGTCGGAACCGTCCTGACTGCGGAGGGAAATCGGTGGGGGGACATCA CCAGCGAGTTGCGTCAGCTCGTTGCCTTGTTAGCACCTGCCCCAGAGGCTGAAGAAGCAGAATTGCTCGTGTCGTCTCAG CACATGCACGACCCTTATGTGATGGCATTTATGGACCGCCTGGACCGAGCCGGCGTGCCGTTTCAGACCATCAGCAGCAC GCTCAGCGACATCAAGTCTCTGTATCAGAATGCGGGTAAAGCTTTCGCCGGATCTATAGACAGTACCCAGCGTCAACAAG AGGTGATTCGTATCATCGGCGCGGCCCATGCACGACGTGCTTCCGACGTTCACTTCATCGTTGGCCACGAAATCACCTAC ATCAAGTTTCGTGAGGACGGTCTCTTGCGGGAGTACGGGCAGATCCAGAGCGCCGTAGGAAACGAGCTCTGTTCTTCACT TTTCAACTCAATGTGTGACGTCAAATCTGAGGGCTACTATCAACCGGAACTGAAACAAGATGCGCGCATGGCTCGCACCT TCCTCGATCAATTGGGACTGTCAGGGGCCCGTGTAGCAACCCGCCCTCTCGTCGAAGGGCCTTTAATGGTGCTGCGACTG ATTTATGACGATCAGGAGAAACAGTCCGTCGACGATCTGGGGTTTCTGCCAGAACAGAATTTGCTGTTCAAGCGGCTGAG AAGTCTTCCTTACGGCGTGATCATATTGACCGGTCCGACTGGATCAGGGAAATCGAAGTCGCTCCAGGTGCAGATCAACC TTCTGGCTGAAGAGTGCAAAGGCACAAAACATATCCTGACCGTTGAGGACCCGCCCGAATATCCGATGCGTGCAAATCAG TCCCCTCTTGGCAGCAATGAGTCATGGGGAGAATCCATTACAAACTCCGTGCGACTCGACCCCGACATACTGATGTATGG GGAGATTCGAGACCTTGAATCAGCTCAGGGGGCACTGCGAGGGGGGATGACCGGCCACCTGGTTTTATCGACTCTGCACA CCAACAACGCTGTAGCAGCAATTCCTCGCCTGATCGACATGGGGGCTGATACAAGCCTGGTCACCGACCCAACACTCATT GTCGGCCTTATCAACCAGTCACTGCTGCCAACGCTGTGCAAGAAGTGTCGCGTGCCTGCGCGCAGCCAGATCAGTACCTT GGATCCGCAGCTGGTCGAGCGGCTCGAAAAGATGACCGTGCTGGATCAGGTCTATCTGGCTGGGCCGGGTTGCTCTCTAT GCCGTGACGGGGTGAACGGCAGGGCCGCTGTCGCCGAGATTCTTCTCCCGACCCACCGGTTCATGGAGGAGATCCGAAAA AATGGCCCAAGCGCTGCGCGCCAGTATTGGGTCAAGCACATGGGTGGTATCACGAAGGTTGCCCACACGCTCATCAAGAT AAATACAGGACTGATTGACCCGCGCATGGCAGAGGCCGTAGTCGGTCCATTGGATTTTGACAGCTACATGCTGGATGCCG AAGCGCCTGAGGCAGAAGTCCATGCTCAGTAA Protein sequence : MSGAVRIEPDIEADPLARQVARPTAVVQPITIAMQSDVVGTVLTAEGNRWGDITSELRQLVALLAPAPEAEEAELLVSSQ HMHDPYVMAFMDRLDRAGVPFQTISSTLSDIKSLYQNAGKAFAGSIDSTQRQQEVIRIIGAAHARRASDVHFIVGHEITY IKFREDGLLREYGQIQSAVGNELCSSLFNSMCDVKSEGYYQPELKQDARMARTFLDQLGLSGARVATRPLVEGPLMVLRL IYDDQEKQSVDDLGFLPEQNLLFKRLRSLPYGVIILTGPTGSGKSKSLQVQINLLAEECKGTKHILTVEDPPEYPMRANQ SPLGSNESWGESITNSVRLDPDILMYGEIRDLESAQGALRGGMTGHLVLSTLHTNNAVAAIPRLIDMGADTSLVTDPTLI VGLINQSLLPTLCKKCRVPARSQISTLDPQLVERLEKMTVLDQVYLAGPGCSLCRDGVNGRAAVAEILLPTHRFMEEIRK NGPSAARQYWVKHMGGITKVAHTLIKINTGLIDPRMAEAVVGPLDFDSYMLDAEAPEAEVHAQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pilQ | CAI36062.1 | type IV pilus protein | Not tested | PPHGI-1 | Protein | 0.0 | 99 |
| pilQ2 | AAP84207.1 | PilQ2 | Virulence | PAPI-1 | Protein | 9e-107 | 47 |
