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Name : Psyr_1473 (Psyr_1473) Accession : YP_234561.1 Strain : Pseudomonas syringae B728a Genome accession: NC_007005 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : 5.99.1.2 Position : 1659653 - 1661674 bp Length : 2022 bp Strand : - Note : decatenates replicating daughter chromosomes DNA sequence : ATGCGTTTGTATCTGTGCGAGAAGCCCAGCCAGGGTAAAGACATCGCCGCTGTACTCGGAGCCAAAACACGAGGTGACGG CTGCATCAAAGGCAACGGTGTAGCCGTGACCTGGGGAATTGGACACTTGCTGGAAACAGCCCCGCCCGATGCATACGGCG AGCACCTGAAAAACTGGAGCTTGGACACGCTTCCAATCCTGCCTGCGGAATGGAAAGTGCTCGTCAAGCCGAAAACCGCC AGTCAGTTCAAGATCGTCAAGCAGCTTCTCAAGCAGGCTACCGAGCTCGTCATTGCGACAGACGCTGACCGCGAGGGGGA GATGATCGCGCGCGAACTGATCGAGTATTGTGGGTACCGAGGACCGATTCAGAGGCTATGGCTGTCTGCGCTCAATGAAG CATCCATCCGCCAAGCGCTCAACACCGTCAAGCAAGGCTCAGAAACCTACCCGTTGTACCTCTCGGCGCTCGCTCGCTCC AGAGCGGACTGGCTCATCGGTATGAATTTTTCGCGGCTATTCACCCTGCTCGGCCGACAGGCCGGGTACACCGGTGTGCT CTCCGTCGGCCGTGTCCAAACACCGACCCTTCGCCTGGTGGTCGACCGCGACCGGGATATCTCGAACTTCATACCCAAAC CGTTCTGGAGTGTCGAGGTTCAGCTCTGGACGGCAGGACAATCGTTCTTGGCGAAATGGGTCGCCGATGAATACCTGGTA GATGAGGAAGGCCGTTGCCTTGATCAAGCTGCTGCAGCTGCTGCACTGGCCGCGCTGAAAAGTAGTCAGGCTGCCTCAAC AGTTTCTGTTGATACAAAGCGTGGCAAGGATCCAGCTCCGCTCCCGTTCGATCTGAGCACCCTGCAGGAGGTGTGCTCTG CAAAGTTTGGGATGGGTGTGCAAGAGACGCTGGACGTAGCACAGTCACTTTACGAAACTCACAAGGCGACGACCTACCCA AGGACCGATTGCGGGTACCTGCCGGAGAGCATGTTTGACGAAGTGCCGATGGTCCTCGATGCTCTGAATCGAACTGATCC ATCCATCGGCAAGACGCTGCAACTGATCGACCCGGAGCAACGTTCCCGGGCATGGAATGACAAAAAAATCACTGGTCCCC ACCATGGGATAATCCCCACGCTTGAACCTGCAAACCTTTCAGCAATGTCTGAGAAGGAACGCAAGGTCTATGAATTGATC CGCGCCCACTTCCTTGCGCAGTTCCTGCCTACCCATGAGTACGACCGGACCGTGGCCACCTTCGAATGCAATGCAGTTCT GCTGCAAGCAGTGGGCAAGCGAATCGTGATCCCAGGCTGGAAGGTTCTTTTTTCTGCATCGTCCGAAGAAGAGGCTAATG ACAGTGGCGGCCGCTCTCAGATCCTGCCAGTGCTGCAAATTGGCACTCGGTGTGACGTTCAGGACCTGCATCTCAAATCG CTGAAAACCGAGCCGCCCAAGGCTTACACCGAAGGTACATTGATCAAAGCGATGAAAACCATTGCCAAGCTGGTGAAGGA TCCACGACTGGCTCAAAAGCTCAAGGAAACCACCGGTATTGGTACTGAAGCAACTCGCGCAGGCACGATTCAGGGCTTGA TAGACCGAGGGTCACTCATCAAGAAAGGTAGCGCGCTGCGAGCAACTGAAGCAGCATTCTCGCTAATTGATGCGGTCCCT CCTGCTGTGGCCGATCCCGGCACAACTGCGATATGGGAGCAAGCGCTTACGATGATCGAGCAAGGCACCTTGACGCTCGA TGATTTTATCGCCAGGCAATCGAGCTGGATCACCAGGCTCGTCGAACAATACAAAGGCACCACCTTGTCGATCAAAGTGC CCGAAGGTCCCAAGTGCCCTTTGTGCAGTGCGAAAACCTCGCAGCGTAAAGGATCCTCAGGCGTTTTCTGGGCGTGTTCC CGCTACCCCGAATGCAAAGGTACGGTGAACATTGGTACAGGGAAGAAAAAATCACCTGGCAAGTCAGCCAAGCCCCGAGC CGCTACTGTCAAGAGCAGCTGA Protein sequence : MRLYLCEKPSQGKDIAAVLGAKTRGDGCIKGNGVAVTWGIGHLLETAPPDAYGEHLKNWSLDTLPILPAEWKVLVKPKTA SQFKIVKQLLKQATELVIATDADREGEMIARELIEYCGYRGPIQRLWLSALNEASIRQALNTVKQGSETYPLYLSALARS RADWLIGMNFSRLFTLLGRQAGYTGVLSVGRVQTPTLRLVVDRDRDISNFIPKPFWSVEVQLWTAGQSFLAKWVADEYLV DEEGRCLDQAAAAAALAALKSSQAASTVSVDTKRGKDPAPLPFDLSTLQEVCSAKFGMGVQETLDVAQSLYETHKATTYP RTDCGYLPESMFDEVPMVLDALNRTDPSIGKTLQLIDPEQRSRAWNDKKITGPHHGIIPTLEPANLSAMSEKERKVYELI RAHFLAQFLPTHEYDRTVATFECNAVLLQAVGKRIVIPGWKVLFSASSEEEANDSGGRSQILPVLQIGTRCDVQDLHLKS LKTEPPKAYTEGTLIKAMKTIAKLVKDPRLAQKLKETTGIGTEATRAGTIQGLIDRGSLIKKGSALRATEAAFSLIDAVP PAVADPGTTAIWEQALTMIEQGTLTLDDFIARQSSWITRLVEQYKGTTLSIKVPEGPKCPLCSAKTSQRKGSSGVFWACS RYPECKGTVNIGTGKKKSPGKSAKPRAATVKSS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 0.0 | 99 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 0.0 | 65 |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 0.0 | 63 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 1e-167 | 52 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 1e-167 | 52 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 1e-167 | 52 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 7e-164 | 51 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 1e-161 | 50 |
| topB | AAW83109.1 | TopB | Not tested | GGI | Protein | 2e-117 | 42 |
