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Name : Psyr_1463 (Psyr_1463) Accession : YP_234551.1 Strain : Pseudomonas syringae B728a Genome accession: NC_007005 Putative virulence/resistance : Unknown Product : DEAD/DEAH box helicase Function : - COG functional category : K : Transcription COG ID : COG0553 EC number : - Position : 1649828 - 1652086 bp Length : 2259 bp Strand : - Note : - DNA sequence : ATGAACGACCTGCCTTTGGCTGCGCCTGCAGACCACCCTTGTGTACCAACTTTGAACATCGGGCTCACTGAGTTTATCGA AGAGTTTGGCGACGAACTCCTGGAGTCACTCAACCGCTCCAACCCACCGGTCTACGCCGGCATCGACAATCCGGCTCGGC AGTGGGTGCTGGACGGCCTCAAAAGACAGCCCTTCCCTGCCCAAGCTCAAGTGGTCCAGGCAATTGCCGCGCTTTTGCTC GATCAGAATGAGCAGGCTGGCATCATCAATGCCGAGATGGGGACAGGCAAAACAATGATGGCCATCGCTCTCGCTGCAGT CATGCATGGATCTGGTTATCGCAGGACGATGGTCATCGCGCCTCCGCACCTGGTCTACAAGTGGCGGCGCGAGATCCTCG AAACCATCCCTGACGCTCGCGTCTGGGTGCTCAACGGACCGGATACCCTGGTCAAGCTGCTGAAGCTGCGCGATCAACTG GGTGATACCTACGACGGACGTCAGGAGTTCTTTATTCTCGGCCGTGTGCGGATGCGGATGGGGTTCCACTGGCGTCTGGC CTTTTGGCAACGACGTGCCGGCGGTGGTAGGAGCCTGGCAGCGTGTCCAGATTGTGGACGTCTGCTCCAGGACCAGGAAG GCAATCTGATCACTGCTGAGGAATTTCAGCGTGAAGAGCGACGTCGACGCTGCGACCACTGTGATGCCGCTTTATGGACG CTGATGCGTCCGGGCAAATCGGATGGCGGCAGCCGCCGTAACACGATCCTAAAGTCGATGTGTCGCATCCCTACAATCGG ACCTGTTCGTGCAGAACGGCTTTTATCTGACTTCGGCGAAGACTTTCTCGCCTCGATGCTTCTGGACAATGTCTCTGAGT TCATCAACCTGATGGACGCCAAAGGCAATTTCATCTTCAGCGACCGCCAAGCCAAGCGCATGGAGCGTGCGATGGCCAAC ATCGAGTTCGGGTTCGGCGAGGGGGGTTACCAACCCACCGAGTTCATCAAGCGCTACCTGCCTGATGGGTGCTTCGACCT ACTGGTCGTGGACGAGGGGCATGAGTACAAAAACAGTGGATCGGCACAAGGTCAGGCTATGGGCGTGCTCGCAGCCAAAG CACGAAAGACTGTGCTGCTGACCGGCACTCTCATGGGCGGCTATGCGGACGATCTGTTCTACCTACTGTTCCGGATCCTC ACCAGACGTATGATCGAGGACGGCTATCAGCCCAACGCGCGAGGAAGCATGGCGCCGGCGGCGATGTCTTTTATGCGGGA TCATGGGGTATTGAAGGATATCTACACCGAGCGTGATGGCAGTTCTCACAAGACTGCCAAAGGCAAGAAACTCTCAGTGC GGACGGTCAAAGCTCCGGGGTTCGGCCCGAAAGGCATTCACCGCTTCGTTCTACCCTTCACTGTGTTCCTGAAACTCAAG GATATCGGCGGCAACGTGCTACCTGGTTACCGGGAGGAGTTCATTGACGTACCGATGTCTCCAGACCAGGAGGCGGCTCA CCGAAAGCTTGCCCAGACATTGACCGTCGAGCTTCGGCAGGCGCTGGCCCGAAGAGATACGACGCTGTTAGGGGTGGTGT TGAACGTGCTGTTGGCATGGCCGGACTGCTGCTTTCGACCTGAGGTGGTAAAACATCCTCGATCCAGAGACACGTTGGCT TTCGTGCCGTCGGTCTTCGATGACGACGAGCTCATGCCGAAGGAACAGGCCCTTCTGGACCTATGTCTTGCTGAAAAAGC CCGGAACCGCAAGGTTCTGGCCTACTCGGTTTACACGGGTACCAGAGACACCACGAGCCGCATGAAGCGGGTGCTCGAGC AATCGGGGCTGAAGGTGGCAGTGCTGCGTGCATCAGTGGACACCGCCAGGCGCGAGGACTGGATCCTCGACCAGGTTGAT CGAGGTGTCGACGTACTGATCACCAACCCGGAGCTCGTAAAAACAGGTCTGGATCTGCTCGACTTTCCGACCATTGCCTT CATGCAGACTGGTTACAACGTCTACACGGTGCAACAGGCGGCAAGGCGCTCATGGAGGATCGGACAGAAGCAGGACGTCC GAGTGATCTTTTTCGGCTACATCGGCAGCTCTCAGATCACCTGCCTGCAGCTGATGGCCAAGAAGATCGCCGTATCGCAG AGCACTTCAGGGGATGTTCCAGAGTCTGGATTGGATTCACTGAACCAGGATGGCGATTCCGTAGAGATGGCACTCGCCAG ACAACTCATCAACGCTTGA Protein sequence : MNDLPLAAPADHPCVPTLNIGLTEFIEEFGDELLESLNRSNPPVYAGIDNPARQWVLDGLKRQPFPAQAQVVQAIAALLL DQNEQAGIINAEMGTGKTMMAIALAAVMHGSGYRRTMVIAPPHLVYKWRREILETIPDARVWVLNGPDTLVKLLKLRDQL GDTYDGRQEFFILGRVRMRMGFHWRLAFWQRRAGGGRSLAACPDCGRLLQDQEGNLITAEEFQREERRRRCDHCDAALWT LMRPGKSDGGSRRNTILKSMCRIPTIGPVRAERLLSDFGEDFLASMLLDNVSEFINLMDAKGNFIFSDRQAKRMERAMAN IEFGFGEGGYQPTEFIKRYLPDGCFDLLVVDEGHEYKNSGSAQGQAMGVLAAKARKTVLLTGTLMGGYADDLFYLLFRIL TRRMIEDGYQPNARGSMAPAAMSFMRDHGVLKDIYTERDGSSHKTAKGKKLSVRTVKAPGFGPKGIHRFVLPFTVFLKLK DIGGNVLPGYREEFIDVPMSPDQEAAHRKLAQTLTVELRQALARRDTTLLGVVLNVLLAWPDCCFRPEVVKHPRSRDTLA FVPSVFDDDELMPKEQALLDLCLAEKARNRKVLAYSVYTGTRDTTSRMKRVLEQSGLKVAVLRASVDTARREDWILDQVD RGVDVLITNPELVKTGLDLLDFPTIAFMQTGYNVYTVQQAARRSWRIGQKQDVRVIFFGYIGSSQITCLQLMAKKIAVSQ STSGDVPESGLDSLNQDGDSVEMALARQLINA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pph67 | CAI36108.1 | superfamily II DNA/RNA helicase | Not tested | PPHGI-1 | Protein | 0.0 | 99 |
| unnamed | ABR13404.1 | putative helicase | Not tested | PAGI-5 | Protein | 0.0 | 88 |
| RL063 | AAP84188.1 | plasmid related protein | Not tested | PAPI-1 | Protein | 0.0 | 86 |
| ORF C71 | AAN62165.1 | conserved hypothetical plasmid protein | Not tested | PAGI-2(C) | Protein | 0.0 | 71 |
| ORF SG81 | AAN62302.1 | conserved hypothetical plasmid protein | Not tested | PAGI-3(SG) | Protein | 0.0 | 69 |
| yea | AAW83099.1 | Yea | Not tested | GGI | Protein | 5e-178 | 51 |
