Gene Information

Name : Psyr_1456 (Psyr_1456)
Accession : YP_234544.1
Strain : Pseudomonas syringae B728a
Genome accession: NC_007005
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1643627 - 1644184 bp
Length : 558 bp
Strand : -
Note : -

DNA sequence :
ATGGCTGCGTCAGTGACGTGGGCAGGCCTTGCCCTGCTGTGCTTCGTGTTGACAAGCCATGCAGCCGAGCTTCCCCCGCC
GGCTTATCAGTTGGCTGCCCGCGCAGCGAACATTCCGTCGGAAGTGCTCTACTCGGTGGCACTGCAGGAAAGTGGGACCC
CACTGCGGGGCCAACTGGTCCCGTGGCCTTGGACGCTGAACGTTGCCGGTGCTAGTTATCGTTTTGCAACCCGTGCCGAT
GCCTGCACCGCACTTATCATCGCACTCGCGCAGGCGGGTCCCAAGCGGGTCGACGTCGGATTAGGTCAGGTCAACATGGG
CTGGAACGGCCAGAGATTTAAATCAAGCAATCCGTGCGACGCGCTCAATCCCTACAAGAACCTCGATGTAGCTGCACAAA
TGCTCGCCGAACTGCGCGCGCTTGGCGGTGACTGGATCACCGTAGCCGGACGCTATCACCGCCCTGCCGGCGGCGCTCCA
GCAGCCAATTACCGCAAGGCCTTTGCCAAACATCTCAGTCGGGTAACCGGCATCCAAATGCTGGTGACCAATCCATGA

Protein sequence :
MAASVTWAGLALLCFVLTSHAAELPPPAYQLAARAANIPSEVLYSVALQESGTPLRGQLVPWPWTLNVAGASYRFATRAD
ACTALIIALAQAGPKRVDVGLGQVNMGWNGQRFKSSNPCDALNPYKNLDVAAQMLAELRALGGDWITVAGRYHRPAGGAP
AANYRKAFAKHLSRVTGIQMLVTNP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pph70 CAI36111.1 soluble lytic murein transglycosylase Not tested PPHGI-1 Protein 5e-81 99
EXA50 ABD94659.1 conserved hypothetical protein Not tested ExoU island A Protein 6e-44 59
unnamed ABR13378.1 hypothetical protein Not tested PAGI-5 Protein 3e-40 59
ORF SG70 AAN62292.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 2e-45 58
RL050 AAP84175.1 conserved hypothetical protein Not tested PAPI-1 Protein 1e-41 58
ORF C67 AAN62161.1 conserved hypothetical protein Not tested PAGI-2(C) Protein 9e-44 57
PMI2591 YP_002152310.1 lytic transglycosylase Not tested Not named Protein 7e-29 48
YE3494A YP_001007653.1 hypothetical protein Not tested YAPI Protein 5e-25 45
STY4559 NP_458645.1 hypothetical protein Not tested SPI-7 Protein 2e-24 45
t4257 NP_807855.1 hypothetical protein Not tested SPI-7 Protein 2e-24 45
YpsIP31758_3720 YP_001402674.1 transglycosylase Not tested YAPI Protein 3e-25 45
api25 CAF28499.1 conserved hypothetical protein Not tested YAPI Protein 2e-25 45