Gene Information

Name : Psyr_1450 (Psyr_1450)
Accession : YP_234538.1
Strain : Pseudomonas syringae B728a
Genome accession: NC_007005
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1637907 - 1638269 bp
Length : 363 bp
Strand : -
Note : -

DNA sequence :
GTGAAAATCAATCTCCCCGCGATCAGATCGACGTCTTCACGCGTGCAGATCTGCTTGACCGCAGTCCTCCTATGCACACC
GTTGCTCTCCACATATGCCCAGGCAGCCGGCACGGCTTCTGAACAAGCCAATGTTGAGGTGATGATTCGCCAGCTCAACG
CGCTTGAGGCGGTTGCTCAACGCAGCGCTGATCTTCCAAACGAATCGGCTCAGCGCTATCACCTGGATTATCCCAGGTTA
GTGAGCGACATCTCCCGCATTCGCCAAGGCTTGCAGGACTATCTGACTCCCTCCCGGGCTCAGCCCCGCGACCCCGTCGA
GATCTCAGGCCATTACAACGTCAGCGGTGATCACACGCCATGA

Protein sequence :
MKINLPAIRSTSSRVQICLTAVLLCTPLLSTYAQAAGTASEQANVEVMIRQLNALEAVAQRSADLPNESAQRYHLDYPRL
VSDISRIRQGLQDYLTPSRAQPRDPVEISGHYNVSGDHTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pph76 CAI36117.1 candidate type III effector Hop protein Not tested PPHGI-1 Protein 2e-45 85
RL030 AAP84157.1 candidate type III effector Hop protein Not tested PAPI-1 Protein 5e-25 61
EXA41 ABD94650.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-24 60
unnamed ABR13370.1 hypothetical protein Not tested PAGI-5 Protein 1e-24 60
ORF C55 AAN62149.1 hypothetical protein Not tested PAGI-2(C) Protein 3e-15 46