Gene Information

Name : Psyr_1428 (Psyr_1428)
Accession : YP_234517.1
Strain : Pseudomonas syringae B728a
Genome accession: NC_007005
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1616775 - 1618142 bp
Length : 1368 bp
Strand : -
Note : -

DNA sequence :
ATGCGCCGCGCTGCCTTTCTGACTATTGCATTCATGAGCACCCTGACAGCCCATACTGCTCTCGCCGAAATCCCGGGAAT
CAATGCAAGCTCATCGGGCAGCGTGATCGGTGACGACGTGCTCTACAGCGTTGGAGGCGGCAACGCTGTGACGATGGGTA
CGGCGGGGAATATGGATAGCATCAGCATCGGCGGTGGCTGGAACAGCAACCTGGTCTGCGGAAACATGAGTATGAATAAC
ACGCTCCAGAATCAGTTGAATGGAGCAACTTCCGGATTTCAGACGATCATGGGGTCGATGATCTCGAACGCTACCAGCGC
CGTTTCATCACTACCAGGACTGATTATCCAGCGGGCTAACCCGGCTTTGTACAACCTGCTCACCAACGGCATTCTGCAGG
GTCGTCTTGACTTCGACCGCTCCAAAGGCACTTGCCGTGCCATTGCTGACAAGATGCTCGATGTCGCTGGAGGACAGATG
GGCTGGAACAAGATCGCCGAGGGCCAGGCTATGAGTCAGGCGGTGAAAAACGGGAACACAGATGCTGTCTCAGCCGTTGC
ACAGGTCGAAAAGCAGGGAGGGAATGACGGTATCACCTGGCTCGGAGGAAATAAGGCCGGCGGATCTGGCCAGCAACCTA
TCAAGGTCGTAGGTGACGTTACTCGTGCGGGATACAACTTGCTGAACGGACGCGGCGCTGCCGATACATCGTCCATTAGT
CCTTCGGCCTGCAACAACGGCATGGTGTGTTCCACCTGGTCCTCGCCTCAGGCAGCTACCACGTTCGCCAACCGGGTACT
GGGAGAGCAACAACAACGCACTTGTGAGGATTGCACCAAAACAACCTCCACTGCCGGCGTTGGCCTCACACCTCTCATCC
AGGAATCCTACGACTCCAAGCTCAAGGCGCTGCAGGAATTGATCTCGGGCAGCAAAGCGCTCACCTTGGAAAACTTGACT
GCAGCGAGTAGCGATTCTCTGCCTGTTACCCGTGGTGTGGTCGAGGCACTCAGGACTGAGCATGACCAGGATATCCTGGC
AAAACGTCTTGCTTCAGAGGTCGCGCTATCTGAGGTTCTCGGCAAAGCGCTACTGCTTCAGCGCACCATGTTCACCGGCA
GCAAAGAGCCGAACATTGCCGCCAACGATGTGGCCCTGCAGGCGGTCAGTCAGCAGAACAGCAGCCTGCAACAGGAAATT
GACAACCTCAAGACCGAGTTGGATATGCGTCGCAGCTTGGCCAGCAACTCACCGACAGCCATCCTACAGAGGGCTCAGAG
CCGGAAGGACAGCTCCAAAGGCATCTTTCAAGGAGATCCAACGCCCGACCGCCTCGATCAGCTGCAGAACCCTGCGAAAG
GTAACTGA

Protein sequence :
MRRAAFLTIAFMSTLTAHTALAEIPGINASSSGSVIGDDVLYSVGGGNAVTMGTAGNMDSISIGGGWNSNLVCGNMSMNN
TLQNQLNGATSGFQTIMGSMISNATSAVSSLPGLIIQRANPALYNLLTNGILQGRLDFDRSKGTCRAIADKMLDVAGGQM
GWNKIAEGQAMSQAVKNGNTDAVSAVAQVEKQGGNDGITWLGGNKAGGSGQQPIKVVGDVTRAGYNLLNGRGAADTSSIS
PSACNNGMVCSTWSSPQAATTFANRVLGEQQQRTCEDCTKTTSTAGVGLTPLIQESYDSKLKALQELISGSKALTLENLT
AASSDSLPVTRGVVEALRTEHDQDILAKRLASEVALSEVLGKALLLQRTMFTGSKEPNIAANDVALQAVSQQNSSLQQEI
DNLKTELDMRRSLASNSPTAILQRAQSRKDSSKGIFQGDPTPDRLDQLQNPAKGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pph90 CAI36131.1 hypothetical protein Not tested PPHGI-1 Protein 0.0 99
ORF SG50 AAN62272.1 hypothetical protein Not tested PAGI-3(SG) Protein 6e-142 67
unnamed ABR13356.1 hypothetical protein Not tested PAGI-5 Protein 2e-149 66
EXA19 ABD94628.1 conserved hypothetical protein Not tested ExoU island A Protein 6e-151 65
RL016 AAP84143.1 putative pathogenesis-related protein Not tested PAPI-1 Protein 2e-151 65
ORF C42 AAN62135.1 hypothetical protein Not tested PAGI-2(C) Protein 3e-134 65