Gene Information

Name : Psyr_1426 (Psyr_1426)
Accession : YP_234515.1
Strain : Pseudomonas syringae B728a
Genome accession: NC_007005
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1614863 - 1616401 bp
Length : 1539 bp
Strand : -
Note : -

DNA sequence :
ATGATCTTGCACACGAATGACTACCTTGAGTATTACCTGACGTTGGTCGGATGGCTCATAAACGGCGGCATCTGGAACAT
GATCGAGGACAGCGGACTCTTCGCAGCGCCCTTTGCCGCCATTGTCATCAGCGAATGGCTCAGAGCCCGCGGTGAGGGAG
CTGATGAGGGCAACAAGGGCGTCCTCTCGTTGGCCCGAGTAGAAAACCGGTTCTACACGGCAATCCTAGTCATCATCCTG
GCTTGCATGCCTCTGGTAAACGTCAGCATTGATACCATCCAGTTCGACCGAAGCCGCTCAGAGCAATGCCAATACTCAAT
ACCCAATCCGACTGATACAGGCTGGGAAACATCCTTCAGTACGCTGAACGGTAAAAGCGCCACAGTGCCCGTCTGGTGGC
TGTTTGTGCATGCGATGTCCAAGGCAGCAACTGCGGCCTCAGTCGCAGCTATTCCCTGTGGAGTGGATTTGCAACAGGTC
CGGATGGACGTCAACAAGGCCCGCATCAACGATCCGCTGCTTGCCCAGGAGGTCGCTGACTTCACGAACGATTGCTACGC
ACGTGCGCGCGCAAAGCTGTTCATGACCCAGCCTACCCTCAGCAATGATCAACTCAACGACGTCAACTGGATCGGTTCAC
ACTTCTTCCTGCAAACATCCGGCTATTACAGCGATGGTTTCTCTGGGTTCAGGTCACACACTCCCCGAACCAAATGGCCC
TATGACGCAACCCGGGACGCGGGCCTGCCACAAACCACTGGTGGTGGTGGGTTTCCTACATGCACTCAATGGTGGTCGGA
TGGAAGCGTCGGGCTCAGAGCCAGGCTGCTGGAACAGGTCAGTCCAGATCTGCTGAGCAAGCTTGCTCAGTGGGCAAAAT
TCATGACCCAGACCGAAGTGAGCGACTCGGTCATTCGCGATCTGGTCTCTCCTAGGAAGCAGCAACTGACCCAGGGTCAG
GTTTATTCAGACTATGGCGGTCAAGTCGGTGGCTCTGTGCTAAATGACTTTACACGCATTGCAGCTACAGCTGGTCAGGC
GGCAGGATCTCTTGTGATGTATCCAGCCATGGACAGTGTAAGGCAAGCAGCGCCCATGGTGATGGCCTTCCTAAAGATGG
CTCTCATCATTTGCATTCCGTTTGTACTGGTGATCGGGATGTTTGATCTGAAGGTCGTGATGACGATTACTTTTGCTGCG
TTCGCTTTGATCTTTGTCGACTTCTGGTTCCAGTTGGCCCGCTGGGTAGATAGCACGATTCTCGATGCCCTTTATGGTAA
CGGGATCGGCAGCAATGTCCCCCACTCCAATTTCGACCCAGTGTTCGGGGCCAGCAATGCCCAAGGAGACTTACTGCTGG
ACTTTGTGATGGGCGCAATGTTTATAGCGCTTCCGGGATTTTGGGTAGTGGCGCTGGGCTGGAGTGGGATGCAACTTGGT
TCACTCATGACAGGGCTTACCATCGGCACCAACGGGGCTAAAGATGCAGGAGGTAAAGGCGCTGATGTAGCAATGGGAAT
CGCGAAGGGGAGGATTTAA

Protein sequence :
MILHTNDYLEYYLTLVGWLINGGIWNMIEDSGLFAAPFAAIVISEWLRARGEGADEGNKGVLSLARVENRFYTAILVIIL
ACMPLVNVSIDTIQFDRSRSEQCQYSIPNPTDTGWETSFSTLNGKSATVPVWWLFVHAMSKAATAASVAAIPCGVDLQQV
RMDVNKARINDPLLAQEVADFTNDCYARARAKLFMTQPTLSNDQLNDVNWIGSHFFLQTSGYYSDGFSGFRSHTPRTKWP
YDATRDAGLPQTTGGGGFPTCTQWWSDGSVGLRARLLEQVSPDLLSKLAQWAKFMTQTEVSDSVIRDLVSPRKQQLTQGQ
VYSDYGGQVGGSVLNDFTRIAATAGQAAGSLVMYPAMDSVRQAAPMVMAFLKMALIICIPFVLVIGMFDLKVVMTITFAA
FALIFVDFWFQLARWVDSTILDALYGNGIGSNVPHSNFDPVFGASNAQGDLLLDFVMGAMFIALPGFWVVALGWSGMQLG
SLMTGLTIGTNGAKDAGGKGADVAMGIAKGRI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pph92 CAI36133.1 hypothetical protein Not tested PPHGI-1 Protein 0.0 97
ORF C40 AAN62133.1 hypothetical protein Not tested PAGI-2(C) Protein 1e-151 62
ORF SG48 AAN62270.1 hypothetical protein Not tested PAGI-3(SG) Protein 1e-151 61
RL014 AAP84141.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-146 60
EXA17 ABD94626.1 conserved hypothetical protein Not tested ExoU island A Protein 4e-146 60
unnamed ABR13354.1 hypothetical protein Not tested PAGI-5 Protein 4e-146 60
t4276 NP_807874.1 hypothetical protein Not tested SPI-7 Protein 3e-92 42
STY4579 NP_458664.1 putative membrane protein Not tested SPI-7 Protein 3e-92 42