|
Name : Psyr_1422 (Psyr_1422) Accession : YP_234511.1 Strain : Pseudomonas syringae B728a Genome accession: NC_007005 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : - COG ID : - EC number : - Position : 1609367 - 1611271 bp Length : 1905 bp Strand : - Note : - DNA sequence : ATGCTTAGTTTCTTCACGCGAAGAAAAGCGTCTCCGATCTCGTCCAATGCTGCTGCAGGCTTTTTCAAACCAGAATCTCC CGACGCGTTGCTGTCGACTTCCCGACGGCGCCAGTTGATTGAAAACATCTGGCAGCGGACCTCTCTGCCCCGTGAGCAGT TCGAGACGCTTTACATGCAGGCATTCAAGAGCTACGCAGCCTTGGTGCAGCATCTCCCAGCCTCTGAGAATCATCACCAT GCATATCATGGTGGCATGCTGGATCACGGTCTCGAAATCGTCGCCTACGCACTTAAGATACGGCAAATGTATCTGCTCCC CATCGGAGCGCCGCCCGAGTCGCAGGCGGCTCAGTCAGAAGCATGGTCTGCAGCATCGGCCTATGGTGCGCTCGTCCACG ACCTGGGCAAGATTGCGGTAGACGTCAAGGTTGAACTCGCAGATGGCACTATCTGGCATCCATGGCACGGGCCTCTGGAT CAGCCATACCGATTCAAGTACGTGAAAGGTCGAGACTATCGGTTGCATGGAGCAGCTTCGTCGCTGATCTACTCCAATGT GATTCCGGCGAAGGCATTGGACTGGCTCAGCGGGTTTCCTGAGCTCTGGTCTCAACTCGTGTTCGCGTTCGCAGGTCAGT ATGAGCATGCCGATATCCTTGGTGAAATTGTCTCCCAAGCTGACCAGGCTTCCGTGGCACAAGAACTCGGAGGCAATCCT GGCCGAGCTATGTCAGCGCCCAAGCAATCTATCCAACGGCAGCTGGCTGAAGGCCTGAGGATGCTCGTGGCGGATAAATT CAAATTGAACCAGCCCGACGGTCCCTCAGACGGATGGCTGACTCAGGAAGGCTTGTGGCTTGTCAGCAAGCCGGCCGTAG ATCAGCTCAGAGCTCTTCTACTGTCTCAGGGTATCGAACACATCCCCTCGTCCAACGCCCCAATGTTTAACCTGCTCCAG GATCAGGCGATCATTCAGCCCAATGGAGAGGGAAAAGCCATTTGGAAGGCCAGCATCGACAATGGTCGTGGCTGGAAGAA CACGTTCACAGTGCTGAAAATAGCGCCGGCACTGATCTGGCCAAACACCACTGATAGACCTGAGACGTATACCGGCACGC TGACCGTGGAATCTGCACCAATGGCGGATGACAACGAGCAAGTTCCTGCTGGAGGCGATGAATCCCAACCGGTGAACAGC AAAAATACGCCTGCAGCATCAGCATCAGCAGCGCGCCCTGCACCTAAGCAAGCACCTGCTGCAGCAAAAGATTTTGATGC GCTGGACGAGCTGCTCGATCTGTTCCCGGACCCGGTAGCGACAGCACCGACTCAACCAGCACCCGAGTCGATAGGCGATG ATGATCAGATTCCGTTTTTGCCCCCTCCTCCGGCAGCTACCAGTCTCAGCCAACCTCGGCAGCTTGTGGGTAACAAGGCA GAGAACCACACAGCCCCAGTCGAAGAGCCGGCAAAAGTCTTGCCGGAAGGTAGCTCAAGCCACGGCTTGAACTTCCTCAC CTGGCTGAAGGGGGGCGTGATCTCCCACAGGATCATCATCAATGACGCCAAGGCACGTGTGCATACCGTGGATGGCACTG CGTTCCTGGTGAGCCCGGACATATTCAAACGTTACGCACTTGAGCAGCCGGGCATAGAGCGTGAGGCTAGAGAGCGGGAC CTGGAAGCTTGGCAGGTTGTTCAGCGTTCTTTTGAGAAGCTGAAAAAACATCGCAAGACTGGCGCAGGCCTGAACATCTG GACATGCCTGGTCAAAGGACCACGAAAAAGCAAGCAACTGCGGGGCTATCTGCTCATAGAGCCTACCGATGTTTTCAGCG AGGTGCCCTATGACAACCCGGTCATCAGCTTGGCAGAATTGGTAGACAAGGACACATCTGAATGA Protein sequence : MLSFFTRRKASPISSNAAAGFFKPESPDALLSTSRRRQLIENIWQRTSLPREQFETLYMQAFKSYAALVQHLPASENHHH AYHGGMLDHGLEIVAYALKIRQMYLLPIGAPPESQAAQSEAWSAASAYGALVHDLGKIAVDVKVELADGTIWHPWHGPLD QPYRFKYVKGRDYRLHGAASSLIYSNVIPAKALDWLSGFPELWSQLVFAFAGQYEHADILGEIVSQADQASVAQELGGNP GRAMSAPKQSIQRQLAEGLRMLVADKFKLNQPDGPSDGWLTQEGLWLVSKPAVDQLRALLLSQGIEHIPSSNAPMFNLLQ DQAIIQPNGEGKAIWKASIDNGRGWKNTFTVLKIAPALIWPNTTDRPETYTGTLTVESAPMADDNEQVPAGGDESQPVNS KNTPAASASAARPAPKQAPAAAKDFDALDELLDLFPDPVATAPTQPAPESIGDDDQIPFLPPPPAATSLSQPRQLVGNKA ENHTAPVEEPAKVLPEGSSSHGLNFLTWLKGGVISHRIIINDAKARVHTVDGTAFLVSPDIFKRYALEQPGIEREARERD LEAWQVVQRSFEKLKKHRKTGAGLNIWTCLVKGPRKSKQLRGYLLIEPTDVFSEVPYDNPVISLAELVDKDTSE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pph99 | CAI36140.1 | predicted HD-superfamily hydrolase | Not tested | PPHGI-1 | Protein | 0.0 | 96 |
| RL003 | AAP84130.1 | pathogenesis-related protein | Not tested | PAPI-1 | Protein | 3e-159 | 55 |
| unnamed | ABR13343.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 3e-160 | 55 |
| EXA2 | ABD94612.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 7e-160 | 55 |
| ORF SG44 | AAN62266.1 | conserved hypothetical protein | Not tested | PAGI-3(SG) | Protein | 4e-145 | 49 |
