|
Name : Psyr_1421 (Psyr_1421) Accession : YP_234510.1 Strain : Pseudomonas syringae B728a Genome accession: NC_007005 Putative virulence/resistance : Unknown Product : Phage integrase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4973 EC number : - Position : 1607964 - 1609370 bp Length : 1407 bp Strand : - Note : - DNA sequence : ATGAAACCGATGACGCTTCCGGAACTGACCCAGGAATACATACTCACTCATGACCTTAGGCCCGACACCGTCAAGATCTA TTGGGCTGCCACAAAATCCTACGTCAGATTCTTCGGCGACTGCCTTGCCTGTGAGACGACCCACCGCGACATGCTTGACT GGCGCAGGTCTGAGCTCGAGCGAATCTCCAAGCGCAGCTGGAACACGTACTCCAGCCATTTGCGCACCATCTACGGCTAT GCAATCGAGCACGGGCTGCTGGAGCTGGTCGTCAACCCACTTAAAAACACGCGTGTGATGCCGCCCAAGCGCCCAAAAAA GACAGTTGCGAACGACGCAAGCGTCCGCGCTCGTAACTGGCTGAGGATGCTGACCGCAGAGGAGCGTGCCACCGCGAAAC GGACAGAAATTACACCTGCCTGGTTCTGGCTGAGCGTGTTCGAAACGTTCTATTACACGGGGATCAGGCTCAACGCGCTG CTATGCCTGAGATATGCGGATGTATACCTGCGCGACCGGCTGATCAGAGTCAGAGGCGAAACGGAGAAGACTCATCGTGA GTTCCTGATTCCTATCCCGGACGGCCTGATGGCTCAGCTAGAAACGCTTATGCAAGCAGCGAAGGCCTTGAGGTTCCAGC CAGGTGACCAGTTGTTCAACGTAAACAGATTTTCAGGCCACTACCGCCGCCATGAGATGAACTCCAACCAAGTCGAGGCG ATGTATAAAAAACTCACTGCGATGACCGGTATACGGATGACGCCTCACCGCTTCCGACACACGATCGCCAGTGAGCTAAT GACGCTACCGGAGCGCAACATCTATCTGACCAAGAAATTGCTGAACCACTCGAATATAGCTACCACGATGGATTACATCG AACCCGACTACGACATGATGCGGGAGGTGATGAATGAACGAGGAAAGCGGCCGGCCAAAATCAGCTACATGGCAAAACCG GATGCGACGCTGCGTGCTGATAGACACCGATCAATATCTGCTCCAGTTAAGGACTTGACTGCGTCGACTAAGACTCGCGG AACAACTGCAGAAGCCGAAAGCTCAGCTGGCCAGGCCTTGGCCAGGCCCCGCGCACTGCCTACACCGGTCTCGACCATGT GCCCATCAACTGCTCCAGATACCAGGACAGTGAACCGCGACGAGACGCCCTCACCCACTAGTGACCGCGACACCGCAGTC AGCCAGCTACCGTTAGGCTGCTCTAGTCCAGAAGATCTGTTGAGAAGCTTGGGGGAACTCACCAGGTGGGTACAGAACAA CATTGCCGGCGGAGGAACTGGTGCTGAACCAGTGATCGAGGAAAGACCTGTCCCAAGCCAGGATGCTCGGCATCTACGCC CGGAAATGCTGGAATTGGCGGGATGGATCGGCAGGTCAGGAACTTGA Protein sequence : MKPMTLPELTQEYILTHDLRPDTVKIYWAATKSYVRFFGDCLACETTHRDMLDWRRSELERISKRSWNTYSSHLRTIYGY AIEHGLLELVVNPLKNTRVMPPKRPKKTVANDASVRARNWLRMLTAEERATAKRTEITPAWFWLSVFETFYYTGIRLNAL LCLRYADVYLRDRLIRVRGETEKTHREFLIPIPDGLMAQLETLMQAAKALRFQPGDQLFNVNRFSGHYRRHEMNSNQVEA MYKKLTAMTGIRMTPHRFRHTIASELMTLPERNIYLTKKLLNHSNIATTMDYIEPDYDMMREVMNERGKRPAKISYMAKP DATLRADRHRSISAPVKDLTASTKTRGTTAEAESSAGQALARPRALPTPVSTMCPSTAPDTRTVNRDETPSPTSDRDTAV SQLPLGCSSPEDLLRSLGELTRWVQNNIAGGGTGAEPVIEERPVPSQDARHLRPEMLELAGWIGRSGT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xerC | CAI36141.1 | putative integrase XerC | Not tested | PPHGI-1 | Protein | 3e-137 | 63 |
| int | ABD94670.1 | putative integrase | Not tested | ExoU island A | Protein | 6e-91 | 57 |
| xerC | AAP82947.1 | integrase | Not tested | PAPI-2 | Protein | 5e-91 | 53 |
| xerC | AAP84129.1 | integrase | Not tested | PAPI-1 | Protein | 4e-90 | 52 |
| unnamed | ABR13342.1 | tyrosine recombinase xerC-like protein | Not tested | PAGI-5 | Protein | 1e-90 | 52 |
