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Name : Psyr_1216 (Psyr_1216) Accession : YP_234308.1 Strain : Pseudomonas syringae B728a Genome accession: NC_007005 Putative virulence/resistance : Virulence Product : type III secretion protein HrpJ Function : - COG functional category : - COG ID : - EC number : - Position : 1373498 - 1374679 bp Length : 1182 bp Strand : - Note : - DNA sequence : ATGAGCCTTCGCCACCAGGGAACCGAACCGGGTCGACGACCCACTCAGCGGTCACACCAGGCCCAGAATCGTCCTATGAA AATTGTCGCCCCGCCTACATTGCCCATTCGTCCGGTAGCGCCAATCCGCGCCATCACGCCGGCTGCGCGAGCGATTCCCG GCGGCGGGTTGCCTGATGAAAAAGGCACCTCGTCACTGCAGGTTTCGCGCTTCGCCGCAGCACTGGTGCAGCACAGCCGG ATCCTGCGTGAGCGAGAACTGATCGCGAGCAGGAACGCGCTGCAGTCGCGGGCCGTCAAGCTGGGCGAGCTTTATCAGTT GCTGATGAGCGCCAGCGACACCGGGCTGGATAACGCCGCCAGACTGCTGCGCAAAAAACTGCTGCAGGACAACGACGCCG ATCTGGAACAGGTTCTGGAATTCGCTGACGGCGACGCTGCCAAGGCTCACGTGGTGTTGCAGGCGGCACGTAAACAGGCA GAAGACGATGGGGCGGAAGCAGAATATGTAGCGCTGACCCAGACGCTTAAACATCTGCGCCGCCAATTCGGCCCGCGTAC CCGCGCCGGAATCAATACCGCAAGAGCCTTCGGGCGCCAGAACATCGATAACAAGCGCCGCACTGCCTTACGCAATCTGT ATGGCGTAGCGGTTTCCGGACAACCCAATGTCACGGGCTTGATCGAAGCCTTGATTGGCGAGCAACAGGAACCCGGCGAG TTCGACCTGAACCTGCGCGACATGCGCATCGCCATCGCCGACGATCTTTCGGCGATTACCCCGTCGGCTTCCCATGAACA ACTGCGCACGCTGATGCATGGCCTGACCACCGCGCGCCATGTCACTACGTTGCTGCGCGGCTGCGAACATCTGCTGGGGC GCATGCGCAAAAAGAATCCCAAACTGACGGTGGACCCGCCGGCCTTCCTCAAACACATGCTGACCCTGACGGCCAATGGC ATGAATGTTAATCAGACCTTGCAACTGACCCAGCACATCGGGGGCAACAGGCTCGAACACCAGCTGGCCTTTCTCAATGG CCTGCGGCCGATGCTGATGCAGTTGCCGATCCTGCTCTGGCGGGACCTGAAAAGCCGCCAGGCCGCGCTGAATAATCTAC TCACGCTGATGGCCGAGCTTACGCAGAAGGAACAGAAGCAACTATACGAGGGGCTTGCCTGA Protein sequence : MSLRHQGTEPGRRPTQRSHQAQNRPMKIVAPPTLPIRPVAPIRAITPAARAIPGGGLPDEKGTSSLQVSRFAAALVQHSR ILRERELIASRNALQSRAVKLGELYQLLMSASDTGLDNAARLLRKKLLQDNDADLEQVLEFADGDAAKAHVVLQAARKQA EDDGAEAEYVALTQTLKHLRRQFGPRTRAGINTARAFGRQNIDNKRRTALRNLYGVAVSGQPNVTGLIEALIGEQQEPGE FDLNLRDMRIAIADDLSAITPSASHEQLRTLMHGLTTARHVTTLLRGCEHLLGRMRKKNPKLTVDPPAFLKHMLTLTANG MNVNQTLQLTQHIGGNRLEHQLAFLNGLRPMLMQLPILLWRDLKSRQAALNNLLTLMAELTQKEQKQLYEGLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpJ | ABQ88351.1 | HrpJ | Virulence | Hrp PAI | Protein | 2e-157 | 98 |
| hrpJ | AAT96138.1 | HrpJ | Virulence | T-PAI | Protein | 4e-133 | 80 |
| hrpJ | AAT96192.1 | HrpJ | Virulence | T-PAI | Protein | 3e-133 | 80 |
| hrpJ | NP_791230.1 | type III secretion protein HrpJ | Virulence | Hrp PAI | Protein | 1e-133 | 79 |
| hrpJ | AAG33876.1 | HrpJ | Virulence | Hrp PAI | Protein | 1e-133 | 79 |
| hrpJ | AAR25630.1 | type III secretion protein HrpJ | Not tested | Not named | Protein | 2e-81 | 56 |
