Gene Information

Name : HrcS (Psyr_1207)
Accession : YP_234299.1
Strain : Pseudomonas syringae B728a
Genome accession: NC_007005
Putative virulence/resistance : Virulence
Product : type III secretion protein HrcS
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4794
EC number : -
Position : 1366004 - 1366270 bp
Length : 267 bp
Strand : -
Note : -

DNA sequence :
ATGGAAGCGTTGGCGTTGTTCAAGCAAGGCATGTTTCTGGTCGTCATCCTGACCGCCCCGCCGCTGGCCGTTGCGGTGCT
GGTGGGTGTGGTCACCTCGCTGCTGCAGGCACTCATGCAGATTCAGGATCAGACATTGCCCTTCGGCATCAAACTGGGCG
CCGTCGGACTGACCCTGGCCATGACCGGCCGCTGGATCGGCGTCGAGCTGATCGAGTTCATCAATATGGCCTTCGACCTG
ATTGCCCGCTCCGGGGTCAGTCACTAA

Protein sequence :
MEALALFKQGMFLVVILTAPPLAVAVLVGVVTSLLQALMQIQDQTLPFGIKLGAVGLTLAMTGRWIGVELIEFINMAFDL
IARSGVSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcS ABQ88360.1 HrcS Virulence Hrp PAI Protein 1e-22 99
hrpO AAB05076.1 HrpO Virulence Hrp PAI Protein 1e-22 99
hrcS AAT96147.1 HrcS Virulence T-PAI Protein 2e-23 98
hrcS AAT96201.1 HrcS Virulence T-PAI Protein 2e-23 98
hrcS AAG33885.1 HrcS Virulence Hrp PAI Protein 3e-22 94
hrcS NP_791221.1 type III secretion protein HrcS Virulence Hrp PAI Protein 4e-22 94
hrcS AAT96263.1 HrcS Virulence S-PAI Protein 4e-14 67
hrcS AAT96304.1 HrcS Virulence S-PAI Protein 4e-14 67
hrcS AAT96344.1 HrcS Virulence S-PAI Protein 4e-14 67
hrcS AAB06006.1 HrcS Virulence Hrp PAI Protein 2e-13 66
hrcS ABA47280.1 HrcS Virulence S-PAI Protein 4e-14 65