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Name : HrcU (Psyr_1205) Accession : YP_234297.1 Strain : Pseudomonas syringae B728a Genome accession: NC_007005 Putative virulence/resistance : Virulence Product : type III secretion protein HrcU Function : - COG functional category : N : Cell motility COG ID : COG1377 EC number : - Position : 1364133 - 1365212 bp Length : 1080 bp Strand : - Note : - DNA sequence : GTGAGCGAAAAAACCGAAAAGGCCACGCCCAAGCAACTGCGTGACGCGCGGGAAAAGGGTCAGGTCGGGCAGAGTCAGGA CCTCGGCAAACTGCTGGTGTTGATGGCCGTCAGTGAAATTACCCTGGCCCTGGCTGATGAAAGCGTCAACCGACTGGAGG CGCTGTTGTCGCTGTCCTTTCAAGGCATCGACCGCAGCTTTGCCGCGTCGGTCGAGCTGATCGCCAGCGAAGGACTCTCG GTACTGCTCAGCTTTACCTTGTGCAGCGTCGGTATAGCGATGCTGATGCGTCTGATCAGCAGCTGGATGCAGATCGGTTT TCTGTTCGCGCCCAAGGCGCTGAAAATCGATCCCAACAAGATCAACCCGTTCTCCCACGCCAAACAGATGTTTTCCGGGC AAAACCTGCTCAACCTGCTGCTCAGTGTGCTCAAGGCCATTGCCATCGGCGCGACGCTGTATGTGCAAGTCAAACCTGTG CTGGGCACCCTGGTGTTGCTGGCCAACAGCGATCTGACGACCTACTGGCATGCCCTGGTCGAGCTGTTCAGGCATATTTT GCGAGTGATATTGGGGCTGCTGCTGGCGATCGCGATGATCGACTTCGCCATGCAGAAATACTTCCATGCGAAAAAACTGC GCATGAGCCACGAGGACATCAAGAAAGAGTACAAGCAATCGGAAGGCGACCCCCACGTCAAAGGCCATCGTCGGCAACTT GCCCAGGAGATCCTCAATCAGGAGCCCAGTGCTGCGCCCAAGCCTGTGGAAGACGCCGACATGCTGCTGGTCAACCCGAC GCACTACGCGGTGGCCCTGTATTACCGACCAGGCGAAACGCCTCTGCCGCTGATTCATTGCAAAGGTGAAGACGAGGAAG CCCTGGCATTGATTGCCCGCGCCAAAAAAGCCGGCATCCCGGTGGTGCAGAGCATCTGGCTGACCAGGACGCTGTACCGC TCCAAGGTCGGAAAATATATCCCCCGGCCCACCCTGCAGGCTGTCGGTCACATCTACAAAGTGGTTCGGCAACTGGACGA AGTCACCGATGAGGTGATTCAGGTTGAAGTCGAGCTGTGA Protein sequence : MSEKTEKATPKQLRDAREKGQVGQSQDLGKLLVLMAVSEITLALADESVNRLEALLSLSFQGIDRSFAASVELIASEGLS VLLSFTLCSVGIAMLMRLISSWMQIGFLFAPKALKIDPNKINPFSHAKQMFSGQNLLNLLLSVLKAIAIGATLYVQVKPV LGTLVLLANSDLTTYWHALVELFRHILRVILGLLLAIAMIDFAMQKYFHAKKLRMSHEDIKKEYKQSEGDPHVKGHRRQL AQEILNQEPSAAPKPVEDADMLLVNPTHYAVALYYRPGETPLPLIHCKGEDEEALALIARAKKAGIPVVQSIWLTRTLYR SKVGKYIPRPTLQAVGHIYKVVRQLDEVTDEVIQVEVEL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcU | ABQ88362.1 | HrcU | Virulence | Hrp PAI | Protein | 7e-164 | 99 |
| hrpY | AAB05078.1 | HrpY | Virulence | Hrp PAI | Protein | 7e-164 | 99 |
| hrcU | AAC35808.1 | hrp type III pathway protein | Virulence | Hrp PAI | Protein | 7e-141 | 91 |
| hrcU | AAT96149.1 | HrcU | Virulence | T-PAI | Protein | 1e-155 | 89 |
| hrcU | AAT96203.1 | HrcU | Virulence | T-PAI | Protein | 1e-155 | 89 |
| hrcU | NP_791219.1 | type III secretion protein HrcU | Virulence | Hrp PAI | Protein | 2e-150 | 86 |
| hrcU | AAG33887.1 | HrcU | Virulence | Hrp PAI | Protein | 3e-129 | 85 |
| hrcU | AAT96346.1 | HrcU | Virulence | S-PAI | Protein | 2e-86 | 56 |
| hrcU | AAT96306.1 | HrcU | Virulence | S-PAI | Protein | 2e-88 | 56 |
| hrcU | AAT96265.1 | HrcU | Virulence | S-PAI | Protein | 9e-89 | 56 |
| hrcU | ABA47282.1 | HrcU | Virulence | S-PAI | Protein | 1e-92 | 55 |
| hrcU | AAB06008.1 | HrcU | Virulence | Hrp PAI | Protein | 3e-84 | 53 |
