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Name : Psyr_1196 (Psyr_1196) Accession : YP_234288.1 Strain : Pseudomonas syringae B728a Genome accession: NC_007005 Putative virulence/resistance : Virulence Product : type III secretion protein HrpD Function : - COG functional category : - COG ID : - EC number : - Position : 1355915 - 1356442 bp Length : 528 bp Strand : + Note : - DNA sequence : ATGGACCTGACCGCCGAGGACTATTGGACTCAGTGGTGGTGCAACCCCTGGCCTTGGGCGCATCCAGGCTGGCAAAGCCG GTTCGCTGAGCGCTGCGGACTGACCGTCAGCGACTGTGAAGCGCTCATGGTCAGCCGTCACGGCGTGTTTCTGCAGAGTG TCGGCATCATGCCAAGTCAACCGCCAATGCCTGCAGAGCCGGTGTTGAACTGGCTGGCGCTGACACCCGCGCAGCGTGAT CAGGCGCTGGATCTGGCGCAGCGCATCTGTTTTTCCCGTAACGAAAGCGACGGCGATGACGGGCAGTGGTGCTGGGCGCT GACCAAGGCGTTGCGCCCTGGTGTCTGGCTGGAGCTGGAGCATGAAGATGCGCGCTTGCTGTTGGGTGCCTGGCTCGGGC CTGAGTATTGGTCGCGATTGCGTCTGGCCTGGGCGCCCGATGAGGTCGCCGAGAGGCCTTGCGCGGCCCCCGAAAATAAA CTTCAGACGCTGTGGCAGGCTGTTCTATGGCGTGTCACCGCGGCCTGA Protein sequence : MDLTAEDYWTQWWCNPWPWAHPGWQSRFAERCGLTVSDCEALMVSRHGVFLQSVGIMPSQPPMPAEPVLNWLALTPAQRD QALDLAQRICFSRNESDGDDGQWCWALTKALRPGVWLELEHEDARLLLGAWLGPEYWSRLRLAWAPDEVAERPCAAPENK LQTLWQAVLWRVTAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpD | AAB05081.1 | HrpD | Virulence | Hrp PAI | Protein | 4e-53 | 94 |
| hrpD | AAC35802.1 | HrpD | Virulence | Hrp PAI | Protein | 9e-64 | 82 |
| hrpD | AAB00130.1 | HrpD | Virulence | Hrp PAI | Protein | 2e-39 | 80 |
| hrpD | NP_791212.1 | type III secretion protein HrpD | Virulence | Hrp PAI | Protein | 4e-56 | 77 |
| hrpD | AAT96156.1 | HrpD | Virulence | T-PAI | Protein | 3e-54 | 67 |
| hrpD | AAT96210.1 | HrpD | Virulence | T-PAI | Protein | 3e-54 | 67 |
