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Name : HrcJ (Psyr_1195) Accession : YP_234287.1 Strain : Pseudomonas syringae B728a Genome accession: NC_007005 Putative virulence/resistance : Virulence Product : type III secretion protein HrcJ Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4669 EC number : - Position : 1355109 - 1355915 bp Length : 807 bp Strand : + Note : - DNA sequence : GTGAAATTTCTGAGCGCAGGGCTGCTGCTGATTTGCATGGTATTGCTCGGCGGCTGCAGTGATGAAACCGATCTGTTCAC CGGCTTGTCCGAGCAGGACTCCAACGAGGTCGTTGCCCGTCTTGCCGATCAGCATATCGACGCGCGTAAACGTCTGGAAA AAACCGGCGTTGTCGTCACCGTCGCGACCAGCGACATGAACCGCGCCGTCAGGGTGCTCAATGCTGCCGGCCTGCCACGC CAGTCTCGCGCCAGTCTGGGGGATATCTTCAAGAAAGAAGGGGTCATTTCGACCCCGCTCGAAGAGCGCGCCCGCTACAT CTATGCCCTGTCTCAGGAACTCGAAGCGACGCTTTCGCAGATAGACGGCGTCATCGTTGCCAGGGTGCACGTGGTACTTC CGGAACGCATCGCACCGGGTGAACCGGTGCAACCTGCCTCTGCTGCGGTGTTCATCAAACACTCCGCAGCGCTTGACCCG GACAGCGTGCGTGGGCGCATTCAACAGATGGTCGCCAGCAGTATCCCCGGCATGTCGACGCAATCGGCAGAGTCGAAAAA GTTTTCCATTGTGTTCGTACCGGCTACCGAGTTTCAGGAAACCACGCAGTGGGTCAGTTTCGGACCGTTCAAGCTGGACA GCGCCAATCTGCCGTTCTGGAACCTGATGCTTTGGCTGGTACCGGTTGGCCTGGCGGTGTTGTTGCTGATCATCGCGCTG CTGTTGCGCAGTGACTGGCGCGCCTCGGTCCTTGGGCGGATCGGCCTTGCCGGCCGTAGCCGCTCGACCGTACCGGCGCG CGCCTGA Protein sequence : MKFLSAGLLLICMVLLGGCSDETDLFTGLSEQDSNEVVARLADQHIDARKRLEKTGVVVTVATSDMNRAVRVLNAAGLPR QSRASLGDIFKKEGVISTPLEERARYIYALSQELEATLSQIDGVIVARVHVVLPERIAPGEPVQPASAAVFIKHSAALDP DSVRGRIQQMVASSIPGMSTQSAESKKFSIVFVPATEFQETTQWVSFGPFKLDSANLPFWNLMLWLVPVGLAVLLLIIAL LLRSDWRASVLGRIGLAGRSRSTVPARA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcJ | AAB05080.1 | HrcJ | Virulence | Hrp PAI | Protein | 1e-108 | 99 |
| hrcJ | AAC35801.1 | putative hrp type III secretion pathway protein | Virulence | Hrp PAI | Protein | 4e-94 | 92 |
| hrcJ | NP_791211.1 | type III secretion protein HrcJ | Virulence | Hrp PAI | Protein | 1e-95 | 91 |
| hrpC | AAB00129.1 | HrpC | Virulence | Hrp PAI | Protein | 1e-95 | 91 |
| hrcJ | AAT96157.1 | HrcJ | Virulence | T-PAI | Protein | 7e-95 | 88 |
| hrcJ | AAT96211.1 | HrcJ | Virulence | T-PAI | Protein | 7e-95 | 88 |
| hrcJ | AAT96359.1 | HrcJ | Virulence | S-PAI | Protein | 3e-59 | 67 |
| hrcJ | AAT96279.1 | HrcJ | Virulence | S-PAI | Protein | 3e-59 | 66 |
| hrcJ | AAT96320.1 | HrcJ | Virulence | S-PAI | Protein | 3e-59 | 66 |
| hrcJ | ABA47308.1 | HrcJ | Virulence | S-PAI | Protein | 2e-58 | 66 |
| hrcJ | AAB49174.1 | HrcJ | Virulence | Hrp PAI | Protein | 2e-56 | 64 |
| lscJ | AAO18027.1 | LscJ | Virulence | TTSS locus | Protein | 1e-29 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| HrcJ | YP_234287.1 | type III secretion protein HrcJ | VFG0409 | Protein | 5e-28 | 41 |
