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Name : Psyr_1183 (Psyr_1183) Accession : YP_234275.1 Strain : Pseudomonas syringae B728a Genome accession: NC_007005 Putative virulence/resistance : Virulence Product : type III effector HopAA1 Function : - COG functional category : - COG ID : - EC number : - Position : 1336758 - 1338209 bp Length : 1452 bp Strand : + Note : - DNA sequence : ATGCACATCAACCGAACCGGCAGCTCGCAGCCCAGCATCGAGCTGGAGCGCTTTTATTCCGCATCGCAATCATTGGCCTC CAGTTCCGTACGCGAGCTCAGCCCTGCCGAACACGCTAATCTGCAAGCCATTACCGATTACCTGAAAGATCATGTATTCG CTGCGCACAAACTGCCGTTGAGTGAGTCGGCCGTCGATCAGGATGCCGTTCATGCGCACAACGAGCAACTCGACAAGATC ATCGATGCTCGCGCCAGACGCTTGCTGGACGAGGGCGAAACGCCTGCCACCATTGCCGACACCTTCGCCAAGGCGGAGAA GTTCGACAGGATGGCAACCACCGCTTCGATCACGCTGCGCGCCACGCCGTTTGCCGCTGCGTCGGTGCTGCAATACATGC AGCCTGCCATCAACAAGGGCGACTGGCTGCCGATGCCGCTCAAACCCCTGACGCCATTTGTGTCCGGGGCGCTGTCCGGG ATCATGGATCAGGTCGGCACTACGGTCATGAATCGCGCCACGGGCAACCTGCACTACCTGAGTACCCCGCCTGAGAAACT GCATGATGCGATGGCGGCTTCCGTGAAGCGTCATTCGCCGGGTGTCATGCGTCAGGCGGTGGATCTGGGTATTGCCATCC AGGCTTACAGCGCGCGAAATGCGGTGCGTACCGTGCTGGCGCCAGCACTGGCATCCAGACCCGCCGTGCAGGGTGCGGTC GACATCAGCGTGTCGGCGGCAGGTGGCCTGGCGGCCAACGCGGGGTTCGGCAATCGTATGCACAGTGTGCAGGCGCGTGA TCACTTGCGCGGCGGTGCGTTCGTGCTCGGCATCAAGGACCAGGAACCCAAGGCAGACTTGAGTGAAGAAACCGACTGGC TCGTGGCTTACAAAGCGATCAAGTCAGCCAGCTACTCCGGCGCGGCGCTGAACGCAGGCAAGCGGGTGGCTGGCCTGCCG CTGGACGTCGCCACCGACGGCCTGAAAGCGGTGAGAAGCCTGGTGTCGGCCACCGGTCTGGCGCAAAACGGGCTGGCCCT GGCAGGCGGCTTTGCCGGCGTGGGCAAATTGCAGGAGATGGCGACCAAAAATATCACTGATCCGGCCACCAAGGCGGCGG TCAGCCAACTGACCAATATGGCCGCCTCGACAGGCGTTTTTGCGGCCTGGACCACCGCAGCGGTCGCAACCGATCCCGCG GTGAAAAAAGCTGAGTCGTTCTTGCAGGATACGGTCAAATCGGCGGCGTCGAGTTCGACCAGCTATGTAGCTGACCAGAC TGTCAAGCTGGCCAAGGCGGGCATTGACGCGAGTGGTGAGGCGATTGCTGCGACGGGGGCATCCTTGCTTGACACATTAC GTCGTCGCAATGCTCGTGAGCCGGACATCGAAGAGGGTGGCATTGCAGCGGGTTCACCGAGCGCGGTGCCGTTCCAGCCA GGGCGCTCATAA Protein sequence : MHINRTGSSQPSIELERFYSASQSLASSSVRELSPAEHANLQAITDYLKDHVFAAHKLPLSESAVDQDAVHAHNEQLDKI IDARARRLLDEGETPATIADTFAKAEKFDRMATTASITLRATPFAAASVLQYMQPAINKGDWLPMPLKPLTPFVSGALSG IMDQVGTTVMNRATGNLHYLSTPPEKLHDAMAASVKRHSPGVMRQAVDLGIAIQAYSARNAVRTVLAPALASRPAVQGAV DISVSAAGGLAANAGFGNRMHSVQARDHLRGGAFVLGIKDQEPKADLSEETDWLVAYKAIKSASYSGAALNAGKRVAGLP LDVATDGLKAVRSLVSATGLAQNGLALAGGFAGVGKLQEMATKNITDPATKAAVSQLTNMAASTGVFAAWTTAAVATDPA VKKAESFLQDTVKSAASSSTSYVADQTVKLAKAGIDASGEAIAATGASLLDTLRRRNAREPDIEEGGIAAGSPSAVPFQP GRS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAF71504.1 | unknown | Not tested | Hrp PAI | Protein | 4e-130 | 76 |
| hopAA1-1 | NP_791199.1 | type III effector HopAA1-1 | Virulence | Hrp PAI | Protein | 5e-130 | 76 |
| hopPtoA2 | AAO33453.1 | Hrp-dependent outer protein A2 | Not tested | Not named | Protein | 7e-131 | 72 |
| unnamed | AAT96169.1 | HopPtoA1-like protein | Virulence | T-PAI | Protein | 8e-104 | 63 |
| unnamed | AAT96223.1 | HopPtoA1-like protein | Virulence | T-PAI | Protein | 8e-104 | 63 |
