Gene Information

Name : cg0978 (cg0978)
Accession : YP_225148.1
Strain : Corynebacterium glutamicum ATCC 13032
Genome accession: NC_006958
Putative virulence/resistance : Resistance
Product : ABC-type transport system, involved in lipoprotein release, ATPase component
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 917167 - 917835 bp
Length : 669 bp
Strand : -
Note : -

DNA sequence : 
ATGACAAACACGCCTTTCCCCCTTGAACTTCAAAACATCTCCTGCGCCTTCGGAGAAGGCCCACGCCACGTCTCCGCGCT
CAACAACGTCTCGCTGGCAGTCAATCCCGGCGAACTCGTTGCCATCATGGGCCCGTCCGGCTCAGGAAAATCCACCTTGC
TCAACGTCGCCGGCCTCCTGCAGCGCGCAACCTCTGGCCATGTGCTTATCGACGGTGCCAGCGCCTCAGACCTCAACGCC
AAACGCGCAGCTGAAACCAGGCGTCGCCACATCGGAGTTATTTTCCAAAACTACAACCTGGTCCCCACCCTCACCGTCGG
AGAAAACGTCGGTCTGCCCCTAGAACTCGACGGCAAAACCGACCGCCAGGCAGTAGCAATCGCACTCGCGGAAGTCGGCC
TCGAAGGCTTCGACGACCGCTTCCCCGAAGAGATCTCCGGCGGCCAAGCCCAGCGCGTCGCCATCGCGAGAGCCCTCATC
GGCCCCCGAAAAATCTTGCTTGCCGACGAACCCACCGGCGCCCTCGACACCTCCACCGGCGACGCAGTCCTCCGCGTCCT
CCGCCAAAGAATCGATTCCGGTGCCGCAGGCCTCCTTGTCACCCACGAACCCCGCTTCGCCGCGTGGGCAGACCGAACAA
TCATGCTTAGGGATGGTGAAATCCAGTGA

Protein sequence : 
MTNTPFPLELQNISCAFGEGPRHVSALNNVSLAVNPGELVAIMGPSGSGKSTLLNVAGLLQRATSGHVLIDGASASDLNA
KRAAETRRRHIGVIFQNYNLVPTLTVGENVGLPLELDGKTDRQAVAIALAEVGLEGFDDRFPEEISGGQAQRVAIARALI
GPRKILLADEPTGALDTSTGDAVLRVLRQRIDSGAAGLLVTHEPRFAAWADRTIMLRDGEIQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-38 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-38 45
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-36 45
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-38 45
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 7e-25 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cg0978 YP_225148.1 ABC-type transport system, involved in lipoprotein release, ATPase component NC_008702.1.4606598. Protein 3e-36 49
cg0978 YP_225148.1 ABC-type transport system, involved in lipoprotein release, ATPase component NC_012469.1.7686878. Protein 1e-38 46
cg0978 YP_225148.1 ABC-type transport system, involved in lipoprotein release, ATPase component CP001581.1.gene598.p Protein 2e-33 44
cg0978 YP_225148.1 ABC-type transport system, involved in lipoprotein release, ATPase component CP001581.1.gene798.p Protein 6e-33 43
cg0978 YP_225148.1 ABC-type transport system, involved in lipoprotein release, ATPase component NC_012469.1.7685735. Protein 5e-31 42
cg0978 YP_225148.1 ABC-type transport system, involved in lipoprotein release, ATPase component NC_012469.1.7686946. Protein 3e-22 41