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Name : capD (cg0417) Accession : YP_224647.1 Strain : Corynebacterium glutamicum ATCC 13032 Genome accession: NC_006958 Putative virulence/resistance : Unknown Product : dTDP-glucose 4,6-dehydratase transmembrane protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : 4.2.1.46 Position : 366833 - 368647 bp Length : 1815 bp Strand : + Note : - DNA sequence : ATGGCAATAAGCATTGGTAAAGCAGGACAGAACTTAAAAGGGTCAGTGCCTATCGGAAAAGTCCTTTTTCTCATTGATGC CCTTGCCTGGATTTCTGCACTATTTATCGGTGTGGTTTTGCGGTATGAATTCAATCTGAGTTCTATCAACTGGAGTGCGT TTGCATGGTTCGGGCTTGCTGCAGTTATTTTGCAGTTTGTTCTCGGACTTTCTCTCCATCTTTACCGCAAGGGATTACGT CACCTTTTCGGTAGCTTCGAAGATACACTAAACGTTTCTATCTCGGTCATTGTTGTCGGTGTTGTCCTTTGGATCGCCTC ACTATTTGTTGGTCAGCGTTGGGAAATCTCACGCGGTGTCATGCTGCTAGTTATCCCGCTTGCTCTCGTATTCGTATTGG CAGTGCGTTATCTCGCGCGTATGCGAGTTGAGCGTCTTCGTCGTCCGGCTGCGGATTCCACACCAGCATTGATTCTTGGT GGTGGATACATCGGTACCAACCTGATCCAGTGGATGATGTCCGATCCTAAGTCGCCTTTCCGCCCAGTCGGCGTTATTGA TGATAACCCTGAATTAGCATGGCAACGCGTACGTGGTGTGCCGGTTCTTGGCAAGTTTGATGATATCGCCCAAGTTGCAT CAGACACTGGCGCAGAACTTCTTATCGTTGCTATTGGTGATGCCGACTCTGCACTTTTAAGGCGTGTCCAAGATACCGCT AATAAAAATGGTCTTTCAGTAAAGGTAATGCCGGCTATTGACCGCGTCGTTTCTAAGGGCGTTCGTGGAAACGATTTGCG TGATCTCTCTATTGAAGATTTGCTTGGACGTCAACCTGTTGAAACCAATGTTTCAGAAATTACTGGCTATCTAACAGGTA AGCGTGTTCTTGTTACCGGTGCAGGTGGGTCAATTGGTTCCCAGCTATGTACGGAAATTGCCAAATACGGACCTGCTGAG CTTATGATGCTTGATCGCGATGAGACTGGTTTGCAGCAGGTTCTGATTAACGTTGCTGGTAACGGTTTGTTGGATACGGA TGCTGTGGTTCTTGCGGATATCCGCGAAGCAGACGCGATGAAAGAGATTTTTCTCAAGCGTAAACCAGAAGTTGTCTTCC ATGCAGCAGCATTAAAGCACTTGCCAATGCTGGAGCAGTATCCAGATGAGGGCTGGAAAACAAACGTTCTAGGAACTCTT AACGTTCTTGCTGCCGCAGAAGCTGTTGGTGTTGAGACTTTCGTCAATATTTCCACCGATAAGGCAGCTAATCCAACCAG CGTCTTAGGGCACTCAAAGCGAGTCGCTGAAAAGCTGACTGCCTGGTATGGACAGAATTCCACCAGCAAGTACCTATCGG TTCGATTTGGAAACGTCATTGGTAGCCGTGGATCGATGCTCCCGACTTTCACCAGGCTAATCATGGAAGATAAACCGCTA ACAGTGACGCACCCGGATGTCACTAGGTTCTTCATGACAATTCCTGAAGCTTGCCAATTGGTCCTGCAAGCCGGTGGTAT TGGACGTTCCGGCGAGGTTCTCATCCTTGACATGGGTGAGCCTGTAAGCATCCTTGAAATTGCACAGCGCATGATCGCAA TGTCCGGTAAAGATATTGACATCGTGTTCACCGGCCTTCGCGAGGGCGAAAAGATGCACGAAGAGCTGGTTGGTGATGGT GAAACCGAAGATCGTCCATTCCACTCAAAGATTTCGCATGCACATGCAGAAAGCCTCGCTCCTAATAATCTCGATAGAGA TCGATTTATGCAACGTGCTGGAAAACTAGCTTCAACAGATTCGGAGATCATCTAA Protein sequence : MAISIGKAGQNLKGSVPIGKVLFLIDALAWISALFIGVVLRYEFNLSSINWSAFAWFGLAAVILQFVLGLSLHLYRKGLR HLFGSFEDTLNVSISVIVVGVVLWIASLFVGQRWEISRGVMLLVIPLALVFVLAVRYLARMRVERLRRPAADSTPALILG GGYIGTNLIQWMMSDPKSPFRPVGVIDDNPELAWQRVRGVPVLGKFDDIAQVASDTGAELLIVAIGDADSALLRRVQDTA NKNGLSVKVMPAIDRVVSKGVRGNDLRDLSIEDLLGRQPVETNVSEITGYLTGKRVLVTGAGGSIGSQLCTEIAKYGPAE LMMLDRDETGLQQVLINVAGNGLLDTDAVVLADIREADAMKEIFLKRKPEVVFHAAALKHLPMLEQYPDEGWKTNVLGTL NVLAAAEAVGVETFVNISTDKAANPTSVLGHSKRVAEKLTAWYGQNSTSKYLSVRFGNVIGSRGSMLPTFTRLIMEDKPL TVTHPDVTRFFMTIPEACQLVLQAGGIGRSGEVLILDMGEPVSILEIAQRMIAMSGKDIDIVFTGLREGEKMHEELVGDG ETEDRPFHSKISHAHAESLAPNNLDRDRFMQRAGKLASTDSEII |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 3e-70 | 41 |
