Gene Information

Name : yfdH (SC0593)
Accession : YP_215580.1
Strain : Salmonella enterica SC-B67
Genome accession: NC_006905
Putative virulence/resistance : Virulence
Product : glycosyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : -
Position : 661356 - 662282 bp
Length : 927 bp
Strand : +
Note : IPR001173: Glycosyl transferase, family 2

DNA sequence :
ATGAAAATCTCGTTAGTCGTTCCGGTCTTCAATGAAGAAGCCACGATACCTATTTTCTATAAAACGGTTCGCGAGTTTGA
AGAGCTAAAACCGTATGAAGTTGAGATTGTTTTCATCAACGACGGAAGCAAAGATGCGACTGAATCAATAATTAACAAAA
TAGCTGCATCTGATCCGCTCGTTATTCCGCTTTCGTTTACGCGAAACTTCGGTAAAGAACCTGCTCTTTTCGCGGGTCTC
GACCATGCAACCGGGGATGCGGTCATTCCTATTGATGTCGATTTACAGGATCCGATAGAAGTTATCCCCCATCTCATTGA
GAAGTGGCAGGCTGGCGCGGATATGGTGCTGGCTAAGCGCTCAGACCGCTCAAATGACGGGCGCATGAAGCGTAAGACAG
CTGAATGGTTTTATAAGCTGCATAATAAAATCAGCAATCCGAAAATTGAAGAGAACGTCGGTGATTTCCGGTTAATGAGC
CGTGAGGTTATCGAAAATATTAAATTAATGCCCGAACGCAACTTGTTCATGAAGGGGGTGCTCAGTTGGGTTGGCGGAAA
AACGGATGTTGTTAAATATGCCCGTGCCGAACGCGTGGCCGGTGATTCGAAATTCAACGGCTGGAAATTATGGAATCTGG
CGCTCGAAGGGATTACCAGCTTCTCAACTTTCCCTCTCCGCATCTGGACGTATATCGGGTTAGCTGTCGCAGGTGTTGCA
TTTCTGTATGGTGCCTGGATAATATTCGACACTCTGGCGTTCGGTAACGCCGTGCGGGGATACCCGTCACTTCTGGTGTC
GATACTGTTTCTTGGTGGCATCCAGCTAATCGGCATTGGTGTACTCGGCGAGTATATCGGAAGAATTTACATTGAAACCA
AAGCAAGACCTAAATATATCATTAAGAAAGTTGGTCAAATAAAATGA

Protein sequence :
MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPLVIPLSFTRNFGKEPALFAGL
DHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKRSDRSNDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMS
REVIENIKLMPERNLFMKGVLSWVGGKTDVVKYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLAVAGVA
FLYGAWIIFDTLAFGNAVRGYPSLLVSILFLGGIQLIGIGVLGEYIGRIYIETKARPKYIIKKVGQIK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 6e-121 90
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 3e-118 87

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfdH YP_215580.1 glycosyltransferase VFG0670 Protein 1e-121 90