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Name : treC (SC4309) Accession : YP_219296.1 Strain : Salmonella enterica SC-B67 Genome accession: NC_006905 Putative virulence/resistance : Unknown Product : trehalose-6-phosphate hydrolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0366 EC number : 3.2.1.93 Position : 4609747 - 4611354 bp Length : 1608 bp Strand : - Note : - DNA sequence : ATGACTATTCCCCTCTGGTGGCAAAACGGCGTTATTTATCAGATCTACCCGAAAAGTTTTCAGGACACGACCGGCAGCGG CACTGGCGATTTACGCGGCGTCACGCAGCGCCTTGACTATCTACAGCGACTCGGCGTAGATGCCATCTGGCTCACGCCGT TTTATATCTCGCCGCAGGTGGATAACGGTTATGACGTCGCAAATTATACGGCTATCGACCCGACCTACGGCACGCTGGAT GATTTTGACGAGCTGGTCGCGCAGGCGAAAGCACGCGGTATTCGTATCATCCTGGATATGGTGTTTAACCATACTTCTAC CCAGCACGCCTGGTTTCGCGAAGCGCTGAACAAAGAGGGTCCATACCGTCAGTTTTATATCTGGCGCGATGGCACGCCGG ATGTCTGCCCGAATAACTGGCAATCCAAATTTGGCGGCAGCGCCTGGCGCTGGCATAGCCAGAGCGAACAATATTATTTA CACCTTTTCGCGCCTGAACAGTCCGACCTGAACTGGGAAAATCCCGCCGTGCGCGCCGAGCTGAAAAAGGTCTGCGAATT CTGGGCCGATCGCGGCGTGGATGGCCTGCGTCTGGACGTGGTGAACCTGATCGCCAAAGATCAGGATTTTCCTGACGATC CGACGGGCGACGGACGCCGCTTTTATACCGACGGACCGCGCGCGCATACGTTTTTACGCGAAATGAACCGTGACGTTTTT ACGCCGCGTAATCTGATGACGGTAGGCGAAATGTCCTCTACCACGCTGGAAAACTGCCAGCAATATGCCGCGCTTAGCGG CGACGAACTCTCGATGACCTTCAATTTTCATCATCTGAAGGTGGATTACCCCAATGGCGAAAAGTGGACGCTGGCAAAAC CTGATTATGTGGCGCTGAAAGCGTTGTTCCGCCACTGGCAACAGGGGATGCATAACGTCGCCTGGAACGCGTTATTCTGG TGTAATCACGATCAGCCGCGCATCGTTTCCCGCTTTGGCGACGAGGGTGAATACCGGGTTCCAGCCGCGAAAATGCTGGC GATGGCGCTGCACGGTATGCAAGGGACGCCTTATATCTATCAGGGCGAAGAAATCGGCATGACCAACCCACACTTTACCC GCATCACCGATTATCGCGACGTGGAAAGCCATAACATGTTTGCCGCGCTACGCGCCGCCGGACGCGACCCCGACGAACTA CTGGCTATCCTGGCCAGTAAATCCCGCGACAACAGCCGCACGCCGATGCAGTGGGACAACGGTAAAAACGCCGGTTTCAC CCAGGGCGAGCCGTGGATAAGCCTGTGCGATAACTATACGGAGGTTAATGTCGCGGCGGCATTACGCGATAAAAACTCGG TGTTTTACACCTATCAAAAGCTGATTGCGCTAGGTAAAACCCAGCCTGTACTGATCTGGGGCGATTATCAGGATCTCCTC CCGGATAGCCCATCAGTATGGTGTTATCGCCGCCAGTGGCAGGGGCAAATCCTGCTGGTTGTCGCTAATCTGAGTAACCA GTGTCAGGAGTGGCATCCACCGCATATCAAAGGACAGTGGCAGGCGCTACTGCATAATTATGGCGAGGTCGCCAGCCAGC CGCGATGA Protein sequence : MTIPLWWQNGVIYQIYPKSFQDTTGSGTGDLRGVTQRLDYLQRLGVDAIWLTPFYISPQVDNGYDVANYTAIDPTYGTLD DFDELVAQAKARGIRIILDMVFNHTSTQHAWFREALNKEGPYRQFYIWRDGTPDVCPNNWQSKFGGSAWRWHSQSEQYYL HLFAPEQSDLNWENPAVRAELKKVCEFWADRGVDGLRLDVVNLIAKDQDFPDDPTGDGRRFYTDGPRAHTFLREMNRDVF TPRNLMTVGEMSSTTLENCQQYAALSGDELSMTFNFHHLKVDYPNGEKWTLAKPDYVALKALFRHWQQGMHNVAWNALFW CNHDQPRIVSRFGDEGEYRVPAAKMLAMALHGMQGTPYIYQGEEIGMTNPHFTRITDYRDVESHNMFAALRAAGRDPDEL LAILASKSRDNSRTPMQWDNGKNAGFTQGEPWISLCDNYTEVNVAAALRDKNSVFYTYQKLIALGKTQPVLIWGDYQDLL PDSPSVWCYRRQWQGQILLVVANLSNQCQEWHPPHIKGQWQALLHNYGEVASQPR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| malL | YP_251987.1 | oligosaccharide alpha-1,6-glucosidase | Not tested | SCCmec | Protein | 7e-122 | 45 |
