Gene Information

Name : SC3478 (SC3478)
Accession : YP_218465.1
Strain : Salmonella enterica SC-B67
Genome accession: NC_006905
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG5426
EC number : -
Position : 3670902 - 3671663 bp
Length : 762 bp
Strand : +
Note : -

DNA sequence : 
ATGAACAATACGCAGAAAAAACTAAAGGTGCTCTTTATTGGAGAATCCTGGCATATTCATATGATTCATTCAAAAGGTTA
TGACAGTTTCACCTCCAGTAAATATGAAGAAGGCGCTACATGGTTACTGGAATGCTTGAGGAAAGGCGGCGTTGAAATTG
ATTACATGCCTGCCCACACGGTACAAATTGCCTTTCCAGAGAGTATTGACGAATTAAATCGTTATGATGTGATTGTTATT
AGCGACATTGGTAGTAATACCTTCCTGCTACAAAATGAAACCTTCTATCAGCTAAAAATAAAACCAAACGCTCTGGAGTC
CATTAAAGAGTACGTCAAAAATGGCGGTGGACTACTCATGATTGGCGGCTATCTGTCATTCATGGGTATTGAGGCAAAAG
CCAATTATAAGAACACCGTTCTTGCTGAGGTTCTGCCAGTTATTATGCTTGATGGCGATGACCGGGTAGAAAAGCCAGAG
GGTATCTGTGCTGAGGCTGTCTCACCTGAACATCCTGTTGTTAACGGGTTCTCAGATTATCCGGTATTTCTTGGATATAA
CCAGGCCGTCGCCAGAGACGATGCCGATGTCGTATTAACAATAAATAATGACCCATTGTTAGTGTTCGGTGAATACCAAC
AGGGTAAAACCGCCTGCTTTATGAGTGACTGCTCCCCCCACTGGGGAACCCAGCAGTTTATGTCATGGCCATTTTATACC
GACCTGTGGGTCAACACGCTTCAATTCATCGCCAGAAAATAA

Protein sequence : 
MNNTQKKLKVLFIGESWHIHMIHSKGYDSFTSSKYEEGATWLLECLRKGGVEIDYMPAHTVQIAFPESIDELNRYDVIVI
SDIGSNTFLLQNETFYQLKIKPNALESIKEYVKNGGGLLMIGGYLSFMGIEAKANYKNTVLAEVLPVIMLDGDDRVEKPE
GICAEAVSPEHPVVNGFSDYPVFLGYNQAVARDDADVVLTINNDPLLVFGEYQQGKTACFMSDCSPHWGTQQFMSWPFYT
DLWVNTLQFIARK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
APECO1_1077 YP_853097.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 1e-103 81
orf245 NP_460346.1 hypothetical protein Not tested SPI-2 Protein 4e-77 64
ORF 245 CAB37418.1 - Not tested SPI-2 Protein 3e-77 64
STY1741 NP_456145.1 Orf 245 protein Not tested SPI-2 Protein 1e-76 64
t1249 NP_805053.1 hypothetical protein Not tested SPI-2 Protein 1e-76 64
SC1402 YP_216389.1 hypothetical protein Not tested SPI-2 Protein 4e-77 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SC3478 YP_218465.1 hypothetical protein VFG0482 Protein 2e-77 64