Gene Information

Name : ssb (SC0332)
Accession : YP_215319.1
Strain : Salmonella enterica SC-B67
Genome accession: NC_006905
Putative virulence/resistance : Virulence
Product : ssDNA-binding protein controls activity of RecBCD nuclease
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 379366 - 379872 bp
Length : 507 bp
Strand : -
Note : IPR000424: Single-strand binding protein

DNA sequence : 
ATGGCTAGTAGAGGAGTAAATAAGGTGATCATCTTAGGCCGGGTCGGACAAGACCCGGAGGTTCGTTATTCACCATCAGG
GACGGCGTTCGCTAACCTGACAGTCGCTACATCAGAGCAGTGGCGAGATAAACAGACTGGCGAACAAAAGGAGCAGACTG
AATGGCATCGTATTGCCGTGGTAGGGAAACTGGCTGAGGTCGTAGGGCAGTATGTGAAAAAAGGTGATCAGGTTTATTTC
GAAGGAATGTTGAAAACCAGAAAGTGGCAAGACCAGTCAGGGCAAGACCGTTACACCACAGAGGTTCACGTAGGCATTAA
TGGCGTGATGCAGATGCTCGGCGGAACTGGTGAAAGCAAACAGCAAGCTGCCAGTAGGCAAACACAGAAACCACAGCAGC
AATCAGCACCTGCGCAACACAACGAACAGCCTATGAACTTCGACGATGACATACCCTTTGCGCCTGTAACTCTCCCCTTC
CCTCGTCACGCTATTCACGCAATTTAA

Protein sequence : 
MASRGVNKVIILGRVGQDPEVRYSPSGTAFANLTVATSEQWRDKQTGEQKEQTEWHRIAVVGKLAEVVGQYVKKGDQVYF
EGMLKTRKWQDQSGQDRYTTEVHVGINGVMQMLGGTGESKQQAASRQTQKPQQQSAPAQHNEQPMNFDDDIPFAPVTLPF
PRHAIHAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 6e-42 54
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 6e-42 54
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 4e-42 54
ssb AAC26638.1 single-strand binding protein Not tested SPI-4 Protein 2e-32 53
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 9e-32 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssb YP_215319.1 ssDNA-binding protein controls activity of RecBCD nuclease VFG0576 Protein 4e-41 61