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Name : safC (SC0294) Accession : YP_215281.1 Strain : Salmonella enterica SC-B67 Genome accession: NC_006905 Putative virulence/resistance : Virulence Product : fimbriae usher Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 338208 - 340718 bp Length : 2511 bp Strand : + Note : IPR000015: Fimbrial biogenesis outer membrane usher protein DNA sequence : ATGAAGCTCAAACAACCTGCCTTGCTACTGTTTATCGCGGGAGTGGTTCATTGCGCAAATGCGCACGCTTACACATTCGA TGCATCAATGTTGGGCGATGCAGCGAAAGGGGTTGATATGTCGCTCTTTAACCAGGGGGTACAACAGCCAGGGACTTATC GAGTGGACGTGATGGTGAATGGTAAACGTATCGACACCCGTGATGTGGTGTTCAAATTGGAAAAGGATGGGCAAGGAACG CCTTTTCTGGCTCCTTGTTTGACGGTCAGTCAGCTTTCACGCTACGGCGTAAAAACGGAAGATTACCCTCAGTTGTGGAA AGCAGCAAAGACCCCAGATGAGTGTGCGGATCTGACCGCCATTCCACAGGCTAAAGCGGTACTGGATATCAATAATCAGC AACTGCAACTGAGTATTCCGCAGTTGGCATTGCGTACGAAATTTAAGGGGATCGCTCCTGAAGATCTCTGGGATGATGGT ATTCCGGCGTTTCTGATGAACTACAGTGCGAGGACAATGCAGACGGATTACAAAATGGATATGGGGAGGCGTGACAACTC TTCCTGGGTACAACTGCAACCGGGAATCAATATAGGTGCGTGGCGTGTCCGCAATGCGACCAGTTGGCAGCGGAGTAGTC AACTGTCGGGGAAGTGGCAGGCAGCATATACCTATGCTGAGCGTGGACTGTACTCACTAAAAAGTCGTCTGACTCTGGGG CAAAAGACTTCGCAGGGGGAGATATTTGATAGTGTGCCATTTACCGGTGTGATGTTGGCATCGGATGACAACATGGTGCC CTACAGTGAGCGGCAGTTTGCTCCGGTAGTGCGTGGGATTGCCCGCACGCAGGCTCGGGTGGAGGTCAAACAGAATGGTT ACACCATTTACAACACCACTGTGGCGCCCGGACCGTTTGCACTGCGGGATCTGTCGGTAACAGACAGTAGTGGTGATCTG CATGTCACCGTGTGGGAGGCCGATGGCAGTACACAAATGTTTGTGGTGCCGTATCAGACCCCGGCGATAGCACTGCACCA GGGATATTTGAAGTACAGCCTGTTGGCGGGCCGATACCGATCGTCAGACTCTGCAACAGATAAGGCGCAGATCGCGCAGG CTACGTTGATGTATGGTCTGCCGTGGAATCTCACTGCATATGGCGGTATACAGAGTGCAACGCACTATCAAGCTGCATCG CTTGGTTTGGGGGTATCTCTCGGGCGGTGGGGGAGTTTATCTGTCGATGGAAGCGACACACACAGTCAGCGTCAGGGGGA AGCGGTACAGCAAGGAGCCTCCTGGCGACTGCGTTACAGCAACCAGCTGACTGCGACGGGAACAAATTTTTCTCTGACGA GATGGCAGTATGCCTCGCAGGGCTATAACACCTTATCCGATGTGCTCGACAGTTATCGACATGATGGCAACCGTCTATGG TCGTGGCGGGAAAATTTGCAGCCGAGCTCGCGTACCACCCTGATGTTGAGTCAGTCATGGGGGAGGCATTTGGGCAATCT GAGTTTAACCGGTTCCCGTACCGACTGGCGTAATCGCCCCGGTCATGATGACAGCTACGGACTGAGTTGGGGAACCTCTA TCGGAGGGGGCTCGCTGTCATTGAACTGGAATCAAAACAGAACGCTGTGGCGCAATGGCGCGCACCGTAAAGAGAACATA ACCAGCCTGTGGTTCAGTATGTCATTAAGCCGCTGGACGGGGAATAATGTAAGTGCCAGTTGGCAGATGACTTCACCATC ACACGGTGGTCAGACGCAACAAGTGGGGGTCAACGGAGAGGCATTCAGTCAGCAACTGGATTGGGAGGTGCGTCAGAGTT ACCGTGCCGATGCCCCGCCAGGTGGTGGTAATAACAGCGCATTGCACTTGGCATGGAATGGGGGTTACGGCCTGTTAGGT GGTGACTATAGCTACAGCCGGGCGATGCGCCAGATGGGAGTCAATATCGCGGGAGGTATAGTTATCCACCATCATGGTGT GACGCTGGGGCAACCTTTGCAAGGCTCAGTGGCGCTGGTTGAAGCGCCAGGGGCCTCGGGGGTGCCAGTTGGCGGCTGGC CTGGCGTTAAGACGGATTTTCGTGGCGACACCACAGTGGGCAACCTGAGCGTCTATCAGGAGAATACAGTCAGCCTCGAT CCGTCGCGACTACCGGATGACGCAGAGGTCACACAAACCGATGTGCGCGTGGTGCCAACCGAAGGGGCGGTGGTGGAAGC GAAGTTTCACACTCGCATCGGGGCCAGGGCACTGATGACGCTGAAACGGGAGGATGGTAGCGCCATTCCTTTCGGGGCGC AGGTTACAGTCAATGGGCAGGATGGCAGTGCTGATCTGGTGGATACTGATAGCCAGGTTTATCTCACTGGTCTGGCGGAT AAGGGCGAACTGACGGTGAAATGGGGAGCACAGCAATGTCGGGTTAACTACCACCTACCTGCCCATAAGGGAATCGCGGG CTTGTATCAAATGAGCGGTCTCTGCAGATAG Protein sequence : MKLKQPALLLFIAGVVHCANAHAYTFDASMLGDAAKGVDMSLFNQGVQQPGTYRVDVMVNGKRIDTRDVVFKLEKDGQGT PFLAPCLTVSQLSRYGVKTEDYPQLWKAAKTPDECADLTAIPQAKAVLDINNQQLQLSIPQLALRTKFKGIAPEDLWDDG IPAFLMNYSARTMQTDYKMDMGRRDNSSWVQLQPGINIGAWRVRNATSWQRSSQLSGKWQAAYTYAERGLYSLKSRLTLG QKTSQGEIFDSVPFTGVMLASDDNMVPYSERQFAPVVRGIARTQARVEVKQNGYTIYNTTVAPGPFALRDLSVTDSSGDL HVTVWEADGSTQMFVVPYQTPAIALHQGYLKYSLLAGRYRSSDSATDKAQIAQATLMYGLPWNLTAYGGIQSATHYQAAS LGLGVSLGRWGSLSVDGSDTHSQRQGEAVQQGASWRLRYSNQLTATGTNFSLTRWQYASQGYNTLSDVLDSYRHDGNRLW SWRENLQPSSRTTLMLSQSWGRHLGNLSLTGSRTDWRNRPGHDDSYGLSWGTSIGGGSLSLNWNQNRTLWRNGAHRKENI TSLWFSMSLSRWTGNNVSASWQMTSPSHGGQTQQVGVNGEAFSQQLDWEVRQSYRADAPPGGGNNSALHLAWNGGYGLLG GDYSYSRAMRQMGVNIAGGIVIHHHGVTLGQPLQGSVALVEAPGASGVPVGGWPGVKTDFRGDTTVGNLSVYQENTVSLD PSRLPDDAEVTQTDVRVVPTEGAVVEAKFHTRIGARALMTLKREDGSAIPFGAQVTVNGQDGSADLVDTDSQVYLTGLAD KGELTVKWGAQQCRVNYHLPAHKGIAGLYQMSGLCR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| safC | NP_454907.1 | outer-membrane fimbrial usher protein | Not tested | SPI-6 | Protein | 0.0 | 98 |
| afaC | AAD44022.2 | AfaC | Virulence | PAI-I AL862 | Protein | 0.0 | 49 |
| afaC | ADD91743.1 | putative AfaC-VIII usher protein | Not tested | PAI-I AL862 | Protein | 0.0 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| safC | YP_215281.1 | fimbriae usher | VFG0853 | Protein | 0.0 | 50 |
| safC | YP_215281.1 | fimbriae usher | VFG0944 | Protein | 0.0 | 49 |
| safC | YP_215281.1 | fimbriae usher | VFG0849 | Protein | 4e-173 | 46 |
| safC | YP_215281.1 | fimbriae usher | VFG0857 | Protein | 1e-174 | 45 |
| safC | YP_215281.1 | fimbriae usher | VFG0419 | Protein | 7e-171 | 44 |
