Gene Information

Name : sipD (SC2815)
Accession : YP_217802.1
Strain : Salmonella enterica SC-B67
Genome accession: NC_006905
Putative virulence/resistance : Virulence
Product : cell invasion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2980283 - 2981314 bp
Length : 1032 bp
Strand : -
Note : -

DNA sequence :
ATGCTTAATATTCAAAATTATTCCGCTTCTCCTCATCCGGGGATCGTTGCCGAATGGCCGCAGACTCCCTCGGCGAGCGA
GCACGTCGAGACTGCCGTGGTACCGTCTACCACAGAACATCGCGGTACAGATATCATTTCATTATCGCAGGCGGCTACTA
AAATCCAGCAGGCACAGCAGACGCTGCAGTCAACGCCACCGATCTCTGAAGAGAATAATGACGAGCGCACGCTGGCGCGC
CAGCAGTTGACCAGCAGCCTGAATGCGCTGGCGAAGTCCGGCGTGTCATTATCCGCAGAACAAAATGAGAACCTGCGGAG
CGCGTTTTCTGCGCCGACGTCGGCCTTATTTAGCGCTTCGCCTATGGCGCAGCCGAGAACAACCATTTCTGATGCTGAGA
TTTGGGATATGGTTTCCCAAAATATATCGGCGATAGGTGACAGCTATCTGGGCGTTTATGAAAACGTTGTCGCAGTCTAT
ACCGATTTTTATCAGGCCTTCAGTGATATTCTTTCCAAAATGGGAGGCTGGTTATTACCAGGTAAGGACGGTAATACCGT
TAAGCTAGATGTTACCTCACTCAAAAATGATTTAAACAGTTTAGTCAATAAATATAATCAAATAAACAGTAATACCGTTT
TATTTCCAGCGCAGTCAGGCAGCGGCGTTAAAGTAGCCACTGAAGCGGAAGCGAGACAGTGGCTCAGTGAATTGAATTTA
CCGAATAGCTGCCTGAAATCTTATGGATCCGGTTATGTCGTCACCGTTGATCTGACGCCATTACAAAAAATGGTTCAGGA
TATTGATGGTTTAGGCGCGCCGGGAAAAGACTCAAAACTCGAAATGGATAACGCCAAATATCAAGCCTGGCAGTCGGGTT
TTAAAGCGCAGGAAGAAAATATGAAAACCACATTACAGACGTTGACGCAAAAATATAGCAATGCCAATTCATTGTACGAC
AACCTGGTAAAAGTGCTGAGCAGTACGATAAGTAGCAGCCTGGAAACCGCCAAAAGCTTCCTGCAAGGATAA

Protein sequence :
MLNIQNYSASPHPGIVAEWPQTPSASEHVETAVVPSTTEHRGTDIISLSQAATKIQQAQQTLQSTPPISEENNDERTLAR
QQLTSSLNALAKSGVSLSAEQNENLRSAFSAPTSALFSASPMAQPRTTISDAEIWDMVSQNISAIGDSYLGVYENVVAVY
TDFYQAFSDILSKMGGWLLPGKDGNTVKLDVTSLKNDLNSLVNKYNQINSNTVLFPAQSGSGVKVATEAEARQWLSELNL
PNSCLKSYGSGYVVTVDLTPLQKMVQDIDGLGAPGKDSKLEMDNAKYQAWQSGFKAQEENMKTTLQTLTQKYSNANSLYD
NLVKVLSSTISSSLETAKSFLQG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sipD YP_217802.1 cell invasion protein Virulence SPI-1 Protein 3e-146 100
sipD NP_461804.1 translocation machinery component Virulence SPI-1 Protein 5e-146 99
sipD NP_457277.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 2e-128 88
sipD NP_806486.1 pathogenicity island 1 effector protein Virulence SPI-1 Protein 2e-128 88

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sipD YP_217802.1 cell invasion protein VFG0544 Protein 2e-146 99
sipD YP_217802.1 cell invasion protein VFG0985 Protein 1e-48 41