Gene Information

Name : sopE2 (SC1852)
Accession : YP_216839.1
Strain : Salmonella enterica SC-B67
Genome accession: NC_006905
Putative virulence/resistance : Virulence
Product : invasion-associated type III-secreted protein effector
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1967962 - 1968684 bp
Length : 723 bp
Strand : -
Note : IPR005414: Salmonella type III secretion SopE effector protein

DNA sequence : 
GTGACTAACATAACACTATCCACCCAGCACTACAGAATCCATAGAAGTGACGTTGAACCAGTAAAAGAAAAAACAACGGA
GAAGGACATTTTTGCAAAAAGTATTACTGCCGTTAGAAATAGCTTTATCAGCCTGTCGACGAGTCTGTCAGATCGTTTTA
GCCTGCATCAACAAACAGACATACCGACTACCCATTTTCATCGTGGGAGCGCCTCTGAGGGTAGGGCAGTATTAACCAGT
AAAACTGTTAAAGATTTTATGCTGCAAAAGCTCAATAGCCTGGATATCAAAGGTAATGCGAGTAAAGATCCGGCCTATGC
TCGTCAGACATGCGAAGCCATATTATCAGCCGTGTACAGTAATAATAAAGATCACTGTTGTAAATTACTCATCAGTAAAG
GGGTCAGTATTACCCCCTTTCTGAAAGAGATAGGAGAGGCTGCGCAGAATGCGGGGCTACCTGGGGAGATAAAAAATGGT
GTATTTACTCCAGGTGGGGCAGGGGCGAATCCTTTTGTCGTCCCCCTCATTGCTGCAGCGAGCATTAAATATCCGCATAT
GTTTATAAATCATAATCAGCAGGTGTCTTTTAAAGCGTATGCTGAGAAAATCGTTATGAAAGAGGTTACACCGCTGTTTA
ATAAGGGGACAATGCCAACGCCACAACAATTTCAGTTAACTATAGAAAATATTGCGAATAAGCATCTTCAGAATGCCTCC
TGA

Protein sequence : 
MTNITLSTQHYRIHRSDVEPVKEKTTEKDIFAKSITAVRNSFISLSTSLSDRFSLHQQTDIPTTHFHRGSASEGRAVLTS
KTVKDFMLQKLNSLDIKGNASKDPAYARQTCEAILSAVYSNNKDHCCKLLISKGVSITPFLKEIGEAAQNAGLPGEIKNG
VFTPGGAGANPFVVPLIAAASIKYPHMFINHNQQVSFKAYAEKIVMKEVTPLFNKGTMPTPQQFQLTIENIANKHLQNAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sopE NP_807899.1 invasion-associated secreted protein Virulence SPI-7 Protein 4e-81 69
sopE NP_458691.1 invasion-associated secreted protein. Virulence SPI-7 Protein 4e-81 69

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sopE2 YP_216839.1 invasion-associated type III-secreted protein effector VFG0467 Protein 3e-110 99