Gene Information

Name : ssaT (SC1442)
Accession : YP_216429.1
Strain : Salmonella enterica SC-B67
Genome accession: NC_006905
Putative virulence/resistance : Virulence
Product : secretion system apparatus protein SsaT
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG4791
EC number : -
Position : 1537343 - 1538122 bp
Length : 780 bp
Strand : +
Note : similar to YscT of the secretion system of Yersinia; IPR002010: Bacterial export protein, family 1

DNA sequence :
ATGGCACAACAGGTAAATGAGTGGCTTATTGCATTGGCTGTGGCTTTTATTCGACCATTAAGCCTTTCTTTATTACTTCC
CCTATTAAAAAGTGGCAGTTTAGGGGCCGCTCTTTTACGTAATGGCGTGCTTATGTCACTTACCTTTCCCATATTACCAA
TCATTTACCAGCAGAAGATTATGATGCATATTGGTAAAGATTACAGTTGGTTAGGGTTAGTCACCGGAGAGGTTATTATT
GGTTTTTTAATTGGGTTTTGTGCGGCGGTTCCCTTTTGGGCCGTTGATATGGCGGGGTTTCTGCTTGATACTTTACGTGG
CGCGACAATGGGTACGATATTCAATTCTACAATAGAAGCTGAAACCTCACTTTTTGGCTTGCTTTTCAGCCAGTTCTTGT
GTGTTATTTTCTTTATAAGCGGCGGCATGGAGTTTATATTAAACATTCTGTATGAGTCATATCAATATTTACCACCAGGG
CGTACTTTATTATTTGACCAGCAATTTTTAAAATATATCCAGGCAGAGTGGAGAACGCTTTATCAATTATGTATCAGCTT
CTCTCTTCCTGCCATAATATGTATGGTATTAGCCGATCTGGCTTTAGGTCTTTTAAATCGGTCGGCACAACAATTGAATG
TGTTTTTCCTCTCAATGCCGCTCAAAAGTATATTGGTTCTACTGACGCTCCTGATCTCATTCCCTTATGCTCTTCATCAC
TATTTGGTTGAAAGCGATAAATTTTATATTTATCTAAAAGACTGGTTTCCATCTGTATGA

Protein sequence :
MAQQVNEWLIALAVAFIRPLSLSLLLPLLKSGSLGAALLRNGVLMSLTFPILPIIYQQKIMMHIGKDYSWLGLVTGEVII
GFLIGFCAAVPFWAVDMAGFLLDTLRGATMGTIFNSTIEAETSLFGLLFSQFLCVIFFISGGMEFILNILYESYQYLPPG
RTLLFDQQFLKYIQAEWRTLYQLCISFSLPAIICMVLADLALGLLNRSAQQLNVFFLSMPLKSILVLLTLLISFPYALHH
YLVESDKFYIYLKDWFPSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaT YP_216429.1 secretion system apparatus protein SsaT Virulence SPI-2 Protein 4e-99 100
ssaT CAA68201.1 secretion system apparatus, SsaT Virulence SPI-2 Protein 6e-98 99
ssaT NP_456107.1 putative type III secretion protein Virulence SPI-2 Protein 9e-98 99
ssaT NP_805092.1 type III secretion protein Virulence SPI-2 Protein 9e-98 99
ssaT NP_460386.1 type III secretion system apparatus protein Virulence SPI-2 Protein 8e-98 99
YPO0272 YP_002345354.1 type III secretion apparatus protein Virulence Not named Protein 3e-45 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssaT YP_216429.1 secretion system apparatus protein SsaT VFG0521 Protein 3e-98 99