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Name : rbsk (SC1403) Accession : YP_216390.1 Strain : Salmonella enterica SC-B67 Genome accession: NC_006905 Putative virulence/resistance : Virulence Product : DeoR family transcriptional regulator Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0524 EC number : - Position : 1502550 - 1503776 bp Length : 1227 bp Strand : - Note : IPR001034: Bacterial regulatory protein, DeoR family; IPR002139: Ribokinase; IPR002173: Carbohydrate kinase, PfkB DNA sequence : ATGTTTAAAGAAGAAAGACGTCATGCCATCATTAATTTACTGATAAAGGATAATAGTGTTAGCGTCAGTAAACTTTCAGA CCTTTATAAGGTTAGCCAGGAGACCATTCGTTCCGATCTACGCTATTTCCAGAAATCAGGTATGCTTCAGCGTTGCTATG GCGGAGGGATTTTAAACCGTGACGCGCTGAGTAAGCTTATCACTGAAAATAAGATTGATATCTCCAGCACTATCGCCACG CCAATCCATCAGGATGCAAAACTGCGCCGGGAAAACACAAAAAAAGCAGGCAAGGTGTGTGTTTTAGGCTCATTCAATAT TGATGTTTCAGCAACCGTGCCGTGGTTTCCACAAAGCGGAGAATCCATTCTGGCCAGTCAATTTGGATTCTATCCTGGCG GTAAAGGAGCCAACCAGGCTTTAGCGGCGAACAATGCCGGCGCTGCGGCACATTTTATTTTTAAAGTGGGCAAAGATCAG TTCAGCGCATTTGCTATGAATCATATTATTCAATCAGGTATCGCCTCATACAGCGCGTATCAAACAGATAAAGCGCCCAC CGGTAGCGCATTGATCTATGTCTCCGCCGTGGATGGCGATAATATTATCGCCATCTACCCTGGCGCCAATATGATGCTCA CCACGCAAGAGATTAACGAGCAACACCGTTATATCGCCGAGTCTGACGTTATGTTAATGCAGCTCGAAACGAACATTGAA GCGTTGACTGAATTTATTCGCCTGGGAAAACAAGAAAATAAAATGATCATGCTAAATCCTGCCCCCTATACGAAACAGGT GACGCATTTATTATCTGATATTGACATCATCACGCCGAATGAAACTGAAGCCTCTTTTTTATCCGGTGTAACCATTACTG ATATTAATGATGCGAAGAAAGCCGGAAATATTATTCTGCAATCCGGGGTGAAAAAAGTCATCATTACCCTTGGCGCCCGT GGATCTCTGCTCTGTGAGCACGCCCGCACGTTGTATATTCCTGCGTGGAGCGCCGTGGTAAAAGATGCCGCCGGGGCCGG TGACGCTTTTAATGGCGCCTTAGCCGCCGCGCTGGCGCGACAAGCAGACATGGTCGCAGCCATTCAATATGCCTCCGCTT TCGCTTCTCTGGCGGTGGAACAAGTCGGTGCGTCGAGTATGCCTCAGCACTTGCAGGTTTTACATCGAATGCGTACCCAA TCTAATAAAGTCATTCACATTAATTAA Protein sequence : MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALSKLITENKIDISSTIAT PIHQDAKLRRENTKKAGKVCVLGSFNIDVSATVPWFPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQ FSAFAMNHIIQSGIASYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE ALTEFIRLGKQENKMIMLNPAPYTKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNIILQSGVKKVIITLGAR GSLLCEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQ SNKVIHIN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rbsk | YP_216390.1 | DeoR family transcriptional regulator | Not tested | SPI-2 | Protein | 2e-164 | 100 |
| ORF 408 | CAB37417.1 | - | Not tested | SPI-2 | Protein | 7e-164 | 99 |
| orf408 | NP_460347.1 | regulatory protein | Not tested | SPI-2 | Protein | 9e-164 | 99 |
| APECO1_1076 | YP_853096.1 | carbohydrate kinase | Not tested | PAI IV APEC-O1 | Protein | 5e-56 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| rbsk | YP_216390.1 | DeoR family transcriptional regulator | VFG0483 | Protein | 4e-164 | 99 |
